HHsearch alignment for GI: 254780725 and conserved domain: COG2403
>COG2403 Predicted GTPase [General function prediction only].
Probab=98.04 E-value=0.0011 Score=41.95 Aligned_cols=198 Identities=14% Similarity=0.152 Sum_probs=107.9
Q ss_pred HHHHHHHHHHCCCCCEEEEEECCCC---HHHHHHHHHCCCCEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEC
Q ss_conf 8899988853289980899816871---8999999976562643189998999997631023322234567537999746
Q gi|254780725|r 93 LSALEPLAEVCDSGTKVIVIGDTND---VSLYRALISNHVSEYLIEPLSVADIINSISAIFTPQEEGKGSSGCSISFIGS 169 (427)
Q Consensus 93 ~~~l~~la~~~~p~~~Vivig~~~d---~~l~r~l~r~Gv~dyl~~P~~~~~l~~ai~~~~~~~~~~~~~~grvIav~g~ 169 (427)
T Consensus 71 ~~~lek~ire~~VD~~VlaySDvs~e~v~~IaS~vLs~GA~f~~~gP~et~~~~----------------ekPviaV~at 134 (449)
T COG2403 71 YDDLEKIIREKDVDIVVLAYSDVSYEHVFRIASRVLSAGADFKELGPKETMLKL----------------EKPVIAVTAT 134 (449)
T ss_pred HHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHH----------------CCCEEEEEEE
T ss_conf 899999998707661687701289899878999997478536872752776651----------------4855999972
Q ss_pred CCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHCCCCCCCCHHHHHCCCCCHHH-----HHHHHHHHCCCCCE
Q ss_conf 9887756899999999996269949999787989860334389987898886318456124-----33765320248980
Q gi|254780725|r 170 RGGVGSSTIAHNCAFSIASVFAMETLLADLDLPYGTANINFDKDPINSISDAIYPVGRIDK-----AFVSRLPVFYAENL 244 (427)
Q Consensus 170 KGGvGkTTiA~nLA~~LA~~~~~~VlLvDlDl~~g~~~~~l~~~~~~~l~d~l~~~~rlD~-----~~l~~~l~~~~~gL 244 (427)
T Consensus 135 rtg~GKsaVS~~v~r~l~e-rgyrv~vVrhPmiy~------~~~ieitv-e~~~k~edld~ha~t~eereeye~~I~tg~ 206 (449)
T COG2403 135 RTGVGKSAVSRYVARLLRE-RGYRVCVVRHPMIYR------GDRIEITV-ERLAKLEDLDRHAATDEEREEYESYIPTGG 206 (449)
T ss_pred CCCCCHHHHHHHHHHHHHH-CCCCEEEEECCEEEC------CCCCHHHH-HHHHCHHHCCCCCCCHHHHHHHHHCCCCCC
T ss_conf 3665567888999999986-698237995570233------77310018-977377652642255666887874364355
Q ss_pred EEEECCCCCCCHHCCCHHHHHHHHHHHHHCCCEEEECCCCCCCHHH-----------------------HHHHHHCCCCC
Q ss_conf 6872487612032079999999899985128889973888889899-----------------------99986201254
Q gi|254780725|r 245 SILTAPAMLSRTYDFDEKMIVPVLDILEQIFPLVILDVPHVWNSWT-----------------------QEVLTLSDKVV 301 (427)
Q Consensus 245 ~lL~a~~~~~~~~~~~~~~l~~ll~~l~~~yd~VIiD~p~~~~~~~-----------------------~~~L~~AD~vv 301 (427)
T Consensus 207 ~vlAG------------vdy~~vlke~~~~aD~IlwdGgnndfPfvkpd~~Ivvvda~rpg~ei~~~pGe~~irlAD~V- 273 (449)
T COG2403 207 GVLAG------------VDYGTVLKEGEKEADFILWDGGNNDFPFVKPDLHIVVVDALRPGEEIGSFPGELRIRLADLV- 273 (449)
T ss_pred CEEEE------------EEHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCEEEEECCCCCCHHHCCCCCCEEEEECCEE-
T ss_conf 34652------------04899998776415589994888778852577059993388872565268773153221289-
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHCCCC
Q ss_conf 35787768899999999999981987
Q gi|254780725|r 302 ITTSLDLAGLRNSKNLIDVLKKLRPA 327 (427)
Q Consensus 302 iV~~p~~~slr~a~~ll~~l~~~~~~ 327 (427)
T Consensus 274 IItkveea~~~kvrkI~~~I~~iNP~ 299 (449)
T COG2403 274 IITKVEEAMAEKVRKIVRNIEEINPK 299 (449)
T ss_pred EEECCCCHHHHHHHHHHHHHHHHCCC
T ss_conf 99613513367899999999860998