HHsearch alignment for GI: 254780725 and conserved domain: KOG0078

Probab=96.76  E-value=0.042  Score=32.08  Aligned_cols=111  Identities=14%  Similarity=0.195  Sum_probs=71.2

Q ss_pred             EEECCCCC--CCHHHHHHHHHCCCCCCCCC-CCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHH
Q ss_conf             99738888--89899999862012543578-7768899999999999981987675389995658987520059999998
Q gi|254780725|r  278 VILDVPHV--WNSWTQEVLTLSDKVVITTS-LDLAGLRNSKNLIDVLKKLRPADKPPYLVLNQVKTPKKPEISISDFCAP  354 (427)
Q Consensus       278 VIiD~p~~--~~~~~~~~L~~AD~vviV~~-p~~~slr~a~~ll~~l~~~~~~~~~~~iVlNr~~~~~~~~i~~~~~~~~  354 (427)
T Consensus        64 QiWDtaGQerf~ti~~sYyrgA~gi~LvyDitne~Sfeni~~W~~~I~e~a~~~v~~~LvGNK~D~~~~-----------  132 (207)
T KOG0078          64 QIWDTAGQERFRTITTAYYRGAMGILLVYDITNEKSFENIRNWIKNIDEHASDDVVKILVGNKCDLEEK-----------  132 (207)
T ss_pred             EEEECCCCHHHHHHHHHHHHHCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCC-----------
T ss_conf             999724305678899999865482499998452577777999999998637888748985114121013-----------


Q ss_pred             HCCCEEEEECCCHHHHHHHHHCCCCEEEECCCC--HHHHHHHHHHHHHHCCCCC
Q ss_conf             489537990687999999884796189888999--8999999999998522122
Q gi|254780725|r  355 LGITPSAIIPFDGAVFGMSANSGKMIHEVDPKS--AIANLLVDFSRVLMGRVTV  406 (427)
Q Consensus       355 lg~~~~~~IP~D~~~~~~A~~~G~pi~e~~p~s--~~a~~~~~La~~i~gr~~~  406 (427)
T Consensus       133 ------R~V~~e~ge-~lA~e~G~~F~EtSAk~~~NI~eaF~~La~~i~~k~~~  179 (207)
T KOG0078         133 ------RQVSKERGE-ALAREYGIKFFETSAKTNFNIEEAFLSLARDILQKLED  179 (207)
T ss_pred             ------CCCCHHHHH-HHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCH
T ss_conf             ------335679999-99998498279713367998899999999999863662