HHsearch alignment for GI: 254780725 and conserved domain: KOG2825
>KOG2825 consensus.
Probab=98.94 E-value=8.2e-09 Score=73.36 Aligned_cols=173 Identities=20% Similarity=0.297 Sum_probs=95.8
Q ss_pred CEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHCCC----CCC--CCHHHHHCCCCCHHHH---
Q ss_conf 5379997469887756899999999996269949999787989860334389----987--8988863184561243---
Q gi|254780725|r 161 GCSISFIGSRGGVGSSTIAHNCAFSIASVFAMETLLADLDLPYGTANINFDK----DPI--NSISDAIYPVGRIDKA--- 231 (427)
Q Consensus 161 grvIav~g~KGGvGkTTiA~nLA~~LA~~~~~~VlLvDlDl~~g~~~~~l~~----~~~--~~l~d~l~~~~rlD~~--- 231 (427)
T Consensus 18 slKwifVGGKGGVGKTTcs~sLAvqla~~-r~~vLiISTDPAHN-lSDAF~qkftk~pt~V~Gf~n-LfAME-IDp~~e~ 93 (323)
T KOG2825 18 SLKWIFVGGKGGVGKTTCSCSLAVQLAKV-RESVLIISTDPAHN-LSDAFSQKFTKTPTKVEGFEN-LFAME-IDPNVEM 93 (323)
T ss_pred EEEEEEECCCCCCCCCCHHHHHHHHHHCC-CCCEEEEECCCCCC-HHHHHHHHHCCCCCCCCCHHH-HEEEE-CCCCHHH
T ss_conf 03699976767767653126899998616-88647861685311-678888775179830357223-10232-2872444
Q ss_pred ------HHHHHHHCCCCCEEEEEC--CCCCCCHHCCCHHHHHHHHHHHH-HCCCEEEECCCCCCC---------------
Q ss_conf ------376532024898068724--87612032079999999899985-128889973888889---------------
Q gi|254780725|r 232 ------FVSRLPVFYAENLSILTA--PAMLSRTYDFDEKMIVPVLDILE-QIFPLVILDVPHVWN--------------- 287 (427)
Q Consensus 232 ------~l~~~l~~~~~gL~lL~a--~~~~~~~~~~~~~~l~~ll~~l~-~~yd~VIiD~p~~~~--------------- 287 (427)
T Consensus 94 ~~~~~m~~~~~~n~~~~g~g~l~e~~~~~Pgideams---fae~~klvk~~~F~~vVFDTAPTGHTLRlL~fP~~lek~l 170 (323)
T KOG2825 94 GDMPEMFGNAANNEGSDGKGMLQELANAFPGIDEAMS---FAEVMKLVKGMNFDVVVFDTAPTGHTLRLLQFPTTLEKGL 170 (323)
T ss_pred HHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCHHHHHH---HHHHHHHHHCCCCCEEEECCCCCCCEEHHHCCCHHHHHHH
T ss_conf 1567875300212466523279998731888057775---8999988630664069951588764102521526899999
Q ss_pred -----------HHH------------------------HHHHH---------HCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf -----------899------------------------99986---------2012543578776889999999999998
Q gi|254780725|r 288 -----------SWT------------------------QEVLT---------LSDKVVITTSLDLAGLRNSKNLIDVLKK 323 (427)
Q Consensus 288 -----------~~~------------------------~~~L~---------~AD~vviV~~p~~~slr~a~~ll~~l~~ 323 (427)
T Consensus 171 gKl~~l~~k~~pm~sq~~sm~g~~~~~~~~l~~kle~~~~~i~~vn~qFkdpd~TtFVcVcI~eflslyEteRliqeL~k 250 (323)
T KOG2825 171 GKLLSLKNKIGPMLSQMGSMFGMEDAGADDLAGKLEELLEVIEKVNEQFKDPDCTTFVCVCIAEFLSLYETERLIQELAK 250 (323)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHH
T ss_conf 99988998878899987635254557777899999999999999999707998725999877888868889999999986
Q ss_pred CCCCCCCCEEEEECCCCCC
Q ss_conf 1987675389995658987
Q gi|254780725|r 324 LRPADKPPYLVLNQVKTPK 342 (427)
Q Consensus 324 ~~~~~~~~~iVlNr~~~~~ 342 (427)
T Consensus 251 ~~idth--nIIVNQLL~~~ 267 (323)
T KOG2825 251 QGIDTH--NIIVNQLLFPD 267 (323)
T ss_pred CCCCCC--CEEEEECCCCC
T ss_conf 488611--20133023799