HHsearch alignment for GI: 254780725 and conserved domain: PHA02519
>PHA02519 plasmid partition protein SopA; Reviewed.
Probab=99.97 E-value=1.4e-28 Score=194.96 Aligned_cols=223 Identities=15% Similarity=0.100 Sum_probs=160.8
Q ss_pred CCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEE-CCCCCCCCHHHCCCCCCC------CHHHHHCCCCCHH
Q ss_conf 456753799974698877568999999999962699499997-879898603343899878------9888631845612
Q gi|254780725|r 157 KGSSGCSISFIGSRGGVGSSTIAHNCAFSIASVFAMETLLAD-LDLPYGTANINFDKDPIN------SISDAIYPVGRID 229 (427)
Q Consensus 157 ~~~~grvIav~g~KGGvGkTTiA~nLA~~LA~~~~~~VlLvD-lDl~~g~~~~~l~~~~~~------~l~d~l~~~~rlD 229 (427)
T Consensus 102 ~~~~~~VIAVaN~KGGVGKTTTavnLA~~LAl-~G~RVL~ID~lDPQ-aslS~~~G~~pd~~~~~~~t~~~~~~~-~~~- 177 (387)
T PHA02519 102 DDKNPVVLAVMSHKGGVYKTSSAVHTAQWLAL-QGHRVLLIEGNDPQ-GTASMYHGYVPDLHIHADDTLLPFYLG-ERD- 177 (387)
T ss_pred CCCCCEEEEEEECCCCCCHHHHHHHHHHHHHH-CCCCEEEEECCCCC-CCCCCCCCCCCCCCCCCCCHHHHHHHC-CCC-
T ss_conf 98875289986168877699999999999997-69968999598852-004314588887664655413577615-755-
Q ss_pred HHHHHHHH-HCCCCCEEEEECCCCCCCHHCC-------------CHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHH
Q ss_conf 43376532-0248980687248761203207-------------999999989998512888997388888989999986
Q gi|254780725|r 230 KAFVSRLP-VFYAENLSILTAPAMLSRTYDF-------------DEKMIVPVLDILEQIFPLVILDVPHVWNSWTQEVLT 295 (427)
Q Consensus 230 ~~~l~~~l-~~~~~gL~lL~a~~~~~~~~~~-------------~~~~l~~ll~~l~~~yd~VIiD~p~~~~~~~~~~L~ 295 (427)
T Consensus 178 --~~~~~I~~T~~~gLDlIPa~l~L~~~E~el~~~~~~~~~~~~~~~~L~~aL~~v~d~YDvVlIDcPPsLG~LTlNAL~ 255 (387)
T PHA02519 178 --NAEYAIKPTCWPGLDIIPSCLALHRIETDLMQYHDAGKLPHPPHLMLRAAIESVWDNYDIIVIDSAPNLGTGTINVVC 255 (387)
T ss_pred --CHHHHEECCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHH
T ss_conf --577603368989967974888999999999878743142234899999998752346998999799736899999999
Q ss_pred HCCCCCCCCCCCHHHHHHHHHHHHHHHH------CCCCCCCCEEEEECCCCCCCCHH--HHHHHHHHHCCCEEEEECCCH
Q ss_conf 2012543578776889999999999998------19876753899956589875200--599999984895379906879
Q gi|254780725|r 296 LSDKVVITTSLDLAGLRNSKNLIDVLKK------LRPADKPPYLVLNQVKTPKKPEI--SISDFCAPLGITPSAIIPFDG 367 (427)
Q Consensus 296 ~AD~vviV~~p~~~slr~a~~ll~~l~~------~~~~~~~~~iVlNr~~~~~~~~i--~~~~~~~~lg~~~~~~IP~D~ 367 (427)
T Consensus 256 AAd~vlIPv~p~~ld~~S~~qFl~m~~~l~~~v~~~g~~~~~r~LiTr~ep~d~~q~~~m~~~lR~~fg~~vl~~~i~~S 335 (387)
T PHA02519 256 AADVIVVATPAELFDYVSVLQFFTMLLDLLATVDLGGFEPVVRLLLTKYSLTVGNQSRWMEEQIRNTWGSMVLRQVVRVT 335 (387)
T ss_pred HCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHH
T ss_conf 82965868896387799999999999999999862378750468775358999888999999999998788864623587
Q ss_pred HHHHHHHHCCCCEEEECC
Q ss_conf 999998847961898889
Q gi|254780725|r 368 AVFGMSANSGKMIHEVDP 385 (427)
Q Consensus 368 ~~~~~A~~~G~pi~e~~p 385 (427)
T Consensus 336 ~aI~~A~~~~qTlYE~~~ 353 (387)
T PHA02519 336 DEVGKGQIKMRTVFEQAA 353 (387)
T ss_pred HHHHHHHHHCCCCEECCC
T ss_conf 999973651274121354