HHsearch alignment for GI: 254780725 and conserved domain: PRK00089

>PRK00089 era GTP-binding protein Era; Reviewed.
Probab=91.36  E-value=0.2  Score=27.92  Aligned_cols=115  Identities=25%  Similarity=0.311  Sum_probs=61.6

Q ss_pred             CCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHCCCCCCCCHHHHHCCCCCHHHHHHHHHH
Q ss_conf             56753799974698877568999999999962699499997879898603343899878988863184561243376532
Q gi|254780725|r  158 GSSGCSISFIGSRGGVGSSTIAHNCAFSIASVFAMETLLADLDLPYGTANINFDKDPINSISDAIYPVGRIDKAFVSRLP  237 (427)
Q Consensus       158 ~~~grvIav~g~KGGvGkTTiA~nLA~~LA~~~~~~VlLvDlDl~~g~~~~~l~~~~~~~l~d~l~~~~rlD~~~l~~~l  237 (427)
T Consensus         6 ~ksG-~VaivG-~PNvGKSTL~N~l~-------~~k~siVS~k~--~TTR------------------~~i~g-------   49 (296)
T PRK00089          6 FKSG-FVAIVG-RPNVGKSTLLNALV-------GQKISIVSPKP--QTTR------------------HRIRG-------   49 (296)
T ss_pred             CCEE-EEEEEC-CCCCCHHHHHHHHH-------CCCEEEECCCC--CCCC------------------CCEEE-------
T ss_conf             8379-999998-99988899999996-------89617614959--9872------------------83899-------


Q ss_pred             HCCCCCEEEEECCCCCCCHHCCCHHHHHHHHHHHHHCCCEEEECCCCCC----------CHHHHHHHHHCCCCCCCCCCC
Q ss_conf             0248980687248761203207999999989998512888997388888----------989999986201254357877
Q gi|254780725|r  238 VFYAENLSILTAPAMLSRTYDFDEKMIVPVLDILEQIFPLVILDVPHVW----------NSWTQEVLTLSDKVVITTSLD  307 (427)
Q Consensus       238 ~~~~~gL~lL~a~~~~~~~~~~~~~~l~~ll~~l~~~yd~VIiD~p~~~----------~~~~~~~L~~AD~vviV~~p~  307 (427)
T Consensus        50 --------i~~-----------------------~~~~q~i~iDTpGi~~~~~~l~~~~~~~~~~ai~~aDlil~viD~~   98 (296)
T PRK00089         50 --------IVT-----------------------EDDAQIIFVDTPGIHKPKRALNRAMNKAAWSSLKDVDLVLFVVDAD   98 (296)
T ss_pred             --------EEE-----------------------ECCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEEECC
T ss_conf             --------999-----------------------7997999998998667467787899999999997599999998578


Q ss_pred             HHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCC
Q ss_conf             68899999999999981987675389995658987
Q gi|254780725|r  308 LAGLRNSKNLIDVLKKLRPADKPPYLVLNQVKTPK  342 (427)
Q Consensus       308 ~~slr~a~~ll~~l~~~~~~~~~~~iVlNr~~~~~  342 (427)
T Consensus        99 ~~~~~~d~~i~~~l~~~---~kp~ilviNKiDlv~  130 (296)
T PRK00089         99 EKIGPGDEFILEKLKKV---KTPVILVLNKIDLVD  130 (296)
T ss_pred             CCCCHHHHHHHHHHHHC---CCCEEEEEEHHHHCC
T ss_conf             89898899999988874---998899954788428