HHsearch alignment for GI: 254780725 and conserved domain: PRK00089
>PRK00089 era GTP-binding protein Era; Reviewed.
Probab=91.36 E-value=0.2 Score=27.92 Aligned_cols=115 Identities=25% Similarity=0.311 Sum_probs=61.6
Q ss_pred CCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHCCCCCCCCHHHHHCCCCCHHHHHHHHHH
Q ss_conf 56753799974698877568999999999962699499997879898603343899878988863184561243376532
Q gi|254780725|r 158 GSSGCSISFIGSRGGVGSSTIAHNCAFSIASVFAMETLLADLDLPYGTANINFDKDPINSISDAIYPVGRIDKAFVSRLP 237 (427)
Q Consensus 158 ~~~grvIav~g~KGGvGkTTiA~nLA~~LA~~~~~~VlLvDlDl~~g~~~~~l~~~~~~~l~d~l~~~~rlD~~~l~~~l 237 (427)
T Consensus 6 ~ksG-~VaivG-~PNvGKSTL~N~l~-------~~k~siVS~k~--~TTR------------------~~i~g------- 49 (296)
T PRK00089 6 FKSG-FVAIVG-RPNVGKSTLLNALV-------GQKISIVSPKP--QTTR------------------HRIRG------- 49 (296)
T ss_pred CCEE-EEEEEC-CCCCCHHHHHHHHH-------CCCEEEECCCC--CCCC------------------CCEEE-------
T ss_conf 8379-999998-99988899999996-------89617614959--9872------------------83899-------
Q ss_pred HCCCCCEEEEECCCCCCCHHCCCHHHHHHHHHHHHHCCCEEEECCCCCC----------CHHHHHHHHHCCCCCCCCCCC
Q ss_conf 0248980687248761203207999999989998512888997388888----------989999986201254357877
Q gi|254780725|r 238 VFYAENLSILTAPAMLSRTYDFDEKMIVPVLDILEQIFPLVILDVPHVW----------NSWTQEVLTLSDKVVITTSLD 307 (427)
Q Consensus 238 ~~~~~gL~lL~a~~~~~~~~~~~~~~l~~ll~~l~~~yd~VIiD~p~~~----------~~~~~~~L~~AD~vviV~~p~ 307 (427)
T Consensus 50 --------i~~-----------------------~~~~q~i~iDTpGi~~~~~~l~~~~~~~~~~ai~~aDlil~viD~~ 98 (296)
T PRK00089 50 --------IVT-----------------------EDDAQIIFVDTPGIHKPKRALNRAMNKAAWSSLKDVDLVLFVVDAD 98 (296)
T ss_pred --------EEE-----------------------ECCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEEECC
T ss_conf --------999-----------------------7997999998998667467787899999999997599999998578
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCC
Q ss_conf 68899999999999981987675389995658987
Q gi|254780725|r 308 LAGLRNSKNLIDVLKKLRPADKPPYLVLNQVKTPK 342 (427)
Q Consensus 308 ~~slr~a~~ll~~l~~~~~~~~~~~iVlNr~~~~~ 342 (427)
T Consensus 99 ~~~~~~d~~i~~~l~~~---~kp~ilviNKiDlv~ 130 (296)
T PRK00089 99 EKIGPGDEFILEKLKKV---KTPVILVLNKIDLVD 130 (296)
T ss_pred CCCCHHHHHHHHHHHHC---CCCEEEEEEHHHHCC
T ss_conf 89898899999988874---998899954788428