HHsearch alignment for GI: 254780725 and conserved domain: PRK01889

>PRK01889 ribosome-associated GTPase; Reviewed.
Probab=94.16  E-value=0.42  Score=25.97  Aligned_cols=96  Identities=21%  Similarity=0.353  Sum_probs=46.8

Q ss_pred             CEEEEECCCCCCCHHHHHHHHHHH-CCCC-CEEEEEECCC---CHHHHHHHHHC---CCCEEECCCCCHHHHHHHHHHCC
Q ss_conf             499998059876778899988853-2899-8089981687---18999999976---56264318999899999763102
Q gi|254780725|r   79 DLIIVQTKVDSREVLSALEPLAEV-CDSG-TKVIVIGDTN---DVSLYRALISN---HVSEYLIEPLSVADIINSISAIF  150 (427)
Q Consensus        79 ~~iivd~~~~~~~~~~~l~~la~~-~~p~-~~Vivig~~~---d~~l~r~l~r~---Gv~dyl~~P~~~~~l~~ai~~~~  150 (427)
T Consensus       113 D~v~IV~s~~~~fn~~rieRyLv~a~~~g~~pvivLnK~DL~~d~~~~~~~~~~~~~g~~v~~vSa~~-~~gl~~L~~~l  191 (353)
T PRK01889        113 DTVFIVCSLNHDFNLRRIERYLALAWESGAEPVVVLTKADLCEDVEEKIAEVEALAPGVPVLAVNALD-GEGVDALQAWL  191 (353)
T ss_pred             CEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEECCC-CCCHHHHHHHH
T ss_conf             68999952899979789999999999869967999966556679999999999855997599997899-84789999986


Q ss_pred             CCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHH
Q ss_conf             3322234567537999746988775689999999
Q gi|254780725|r  151 TPQEEGKGSSGCSISFIGSRGGVGSSTIAHNCAF  184 (427)
Q Consensus       151 ~~~~~~~~~~grvIav~g~KGGvGkTTiA~nLA~  184 (427)
T Consensus       192 --------~~GkT~vl~G-~SGVGKSTLiN~L~g  216 (353)
T PRK01889        192 --------KPGKTVALLG-SSGVGKSTLVNALLG  216 (353)
T ss_pred             --------HCCCEEEEEC-CCCCCHHHHHHHHCC
T ss_conf             --------3497899977-888669999987565