HHsearch alignment for GI: 254780725 and conserved domain: PRK05541

Probab=96.42  E-value=0.041  Score=32.15  Aligned_cols=108  Identities=14%  Similarity=0.035  Sum_probs=60.5

Q ss_pred             CCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHCCCCCCCCHHHHHCCCCCHHHHHHHHHH
Q ss_conf             56753799974698877568999999999962699499997879898603343899878988863184561243376532
Q gi|254780725|r  158 GSSGCSISFIGSRGGVGSSTIAHNCAFSIASVFAMETLLADLDLPYGTANINFDKDPINSISDAIYPVGRIDKAFVSRLP  237 (427)
Q Consensus       158 ~~~grvIav~g~KGGvGkTTiA~nLA~~LA~~~~~~VlLvDlDl~~g~~~~~l~~~~~~~l~d~l~~~~rlD~~~l~~~l  237 (427)
T Consensus         4 ~~kg~viW~TG-LsGSGKTTiA~~l~~~L~~-~g~~~~~LDGD~lR----~~~~~~-gfs~~~R~~n~~r~~--~lak~l   74 (176)
T PRK05541          4 KPNGYVIWITG-LAGSGKTTIAKALYERLKL-KYSNVIYLDGDELR----EIFGHS-GYDKESRIEMALKRA--KLAAFL   74 (176)
T ss_pred             CCCCEEEEEEC-CCCCCHHHHHHHHHHHHHH-CCCCEEEECCHHHH----HHHCCC-CCCHHHHHHHHHHHH--HHHHHH
T ss_conf             88867999789-9999899999999999997-59977998868999----873658-989999999999999--999998


Q ss_pred             HCCCCCEEEEECCCCCCCHHCCCHHHHHHHHHHHHHCCCEEEECCC
Q ss_conf             0248980687248761203207999999989998512888997388
Q gi|254780725|r  238 VFYAENLSILTAPAMLSRTYDFDEKMIVPVLDILEQIFPLVILDVP  283 (427)
Q Consensus       238 ~~~~~gL~lL~a~~~~~~~~~~~~~~l~~ll~~l~~~yd~VIiD~p  283 (427)
T Consensus        75 ~--~~g~~vIvs~isp~~~-------~R~~~R~~~~~~~EVyv~~p  111 (176)
T PRK05541         75 A--DQGMIVIVTTISMFNE-------IYAYNRKHLPNYFEVYLKCD  111 (176)
T ss_pred             H--HCCCCEEEEECCCCHH-------HHHHHHHHCCCCEEEEEECC
T ss_conf             6--4698036752279899-------99999974887689999489