HHsearch alignment for GI: 254780725 and conserved domain: PRK07471
>PRK07471 DNA polymerase III subunit delta'; Validated.
Probab=96.78 E-value=0.041 Score=32.16 Aligned_cols=147 Identities=14% Similarity=0.082 Sum_probs=76.9
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHCCCCCCCCH
Q ss_conf 89999976310233222345675379997469887756899999999996269949999787989860334389987898
Q gi|254780725|r 139 VADIINSISAIFTPQEEGKGSSGCSISFIGSRGGVGSSTIAHNCAFSIASVFAMETLLADLDLPYGTANINFDKDPINSI 218 (427)
Q Consensus 139 ~~~l~~ai~~~~~~~~~~~~~~grvIav~g~KGGvGkTTiA~nLA~~LA~~~~~~VlLvDlDl~~g~~~~~l~~~~~~~l 218 (427)
T Consensus 22 qe~~~~~L~~a~~-----~grl~HA~Lf~Gp-~GiGK~tlA~~~A~~ll~~-~-~~~----~~~~~~~~~~l~~~~~~p~ 89 (363)
T PRK07471 22 HAAAEAALLDAYR-----SGRLHHAWLIGGP-QGIGKATLAYRMARFLLAT-P-PPG----GDAVFPPPASLAVDPDHPV 89 (363)
T ss_pred HHHHHHHHHHHHH-----CCCCCCEEEEECC-CCCCHHHHHHHHHHHHHCC-C-CCC----CCCCCCCHHHHCCCCCCCH
T ss_conf 1999999999998-----5997645876799-9818899999999998579-9-977----7776787053125877728
Q ss_pred HHHHCCCCCHHHHHHHHHHHCCCCCEEEEECCCC---CCCHHCCCHHHHHHHHHHHH-----HCCCEEEECCCCCCCHHH
Q ss_conf 8863184561243376532024898068724876---12032079999999899985-----128889973888889899
Q gi|254780725|r 219 SDAIYPVGRIDKAFVSRLPVFYAENLSILTAPAM---LSRTYDFDEKMIVPVLDILE-----QIFPLVILDVPHVWNSWT 290 (427)
Q Consensus 219 ~d~l~~~~rlD~~~l~~~l~~~~~gL~lL~a~~~---~~~~~~~~~~~l~~ll~~l~-----~~yd~VIiD~p~~~~~~~ 290 (427)
T Consensus 90 ~r~i--------------~~~~hpdl~~i~r~~d~k~~~~~~~I~Vd~iR~l~~~~~~~p~~g~~kV~IId~ad~mn~~a 155 (363)
T PRK07471 90 ARRI--------------AAGAHGGLLTLERSWNEKGKRLRTVITVDEVRETIGFFGLTAAEGGWRVVIVDTADEMNANA 155 (363)
T ss_pred HHHH--------------HCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECHHHHCHHH
T ss_conf 9999--------------52699984667620011333212445399999999997248524896699986878738899
Q ss_pred HHHHHH------CCCCCCCCCCCHHHH
Q ss_conf 999862------012543578776889
Q gi|254780725|r 291 QEVLTL------SDKVVITTSLDLAGL 311 (427)
Q Consensus 291 ~~~L~~------AD~vviV~~p~~~sl 311 (427)
T Consensus 156 aNALLK~LEEPP~~t~fiLit~~~~~l 182 (363)
T PRK07471 156 ANALLKVLEEPPARSLLLLVSHAPARL 182 (363)
T ss_pred HHHHHHHHCCCCCCEEEEEEECCHHHC
T ss_conf 999999721589883899863997777