HHsearch alignment for GI: 254780725 and conserved domain: PRK08939

>PRK08939 primosomal protein DnaI; Reviewed.
Probab=93.24  E-value=0.38  Score=26.25  Aligned_cols=75  Identities=15%  Similarity=0.215  Sum_probs=46.6

Q ss_pred             HHHHHHCCCCEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEC
Q ss_conf             9999976562643189998999997631023322234567537999746988775689999999999626994999978
Q gi|254780725|r  121 YRALISNHVSEYLIEPLSVADIINSISAIFTPQEEGKGSSGCSISFIGSRGGVGSSTIAHNCAFSIASVFAMETLLADL  199 (427)
Q Consensus       121 ~r~l~r~Gv~dyl~~P~~~~~l~~ai~~~~~~~~~~~~~~grvIav~g~KGGvGkTTiA~nLA~~LA~~~~~~VlLvDl  199 (427)
T Consensus       119 pk~i~~as~~d~~~~d~~R~~a~~~a~~F~~~y~--~~~~~kGlyl~G-~~G~GKTyL~~aian~La~-~g~~v~~v~~  193 (306)
T PRK08939        119 PKDLLQATLADIDLDDLDRLDALMAALDFLEAYK--PGEKVKGLYLYG-DFGVGKTYLLAAIANELAK-KGVSSTLVHF  193 (306)
T ss_pred             CHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHC--CCCCCCEEEEEC-CCCCCHHHHHHHHHHHHHH-CCCEEEEEEH
T ss_conf             7999809898648897789999999999999737--698887788989-9999899999999999998-6992999875