HHsearch alignment for GI: 254780725 and conserved domain: PRK09468

>PRK09468 ompR osmolarity response regulator; Provisional.
Probab=99.35  E-value=5.3e-11  Score=86.81  Aligned_cols=116  Identities=13%  Similarity=0.202  Sum_probs=95.4

Q ss_pred             EEEEEECCHHHHHHHHHHHHHHHHHHCEEEEE-CCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCE
Q ss_conf             59998389899999998864110020223730-69989999998618998499998059876778899988853289980
Q gi|254780725|r   30 SVHVFCVTDTLYSVVERSKIDPRMSQVNMRIT-RGSIAEAVSCFSDSSTPDLIIVQTKVDSREVLSALEPLAEVCDSGTK  108 (427)
Q Consensus        30 ~~~~f~~~~~~~~~~~~~~~drr~~~~~~~v~-~g~~~~A~~~~~~~~~P~~iivd~~~~~~~~~~~l~~la~~~~p~~~  108 (427)
T Consensus         7 kILiVEDd~~~~~~l~~~L-----~~~g~~v~~a~~~~~a~~~~~~~-~~DlvilDi~lp~~dG~~l~~~iR~~-~~~~p   79 (239)
T PRK09468          7 KILVVDDDMRLRALLERYL-----TEQGFQVRSAANAEQMDRLLTRE-SFHLMVLDLMLPGEDGLSICRRLRSQ-NNPTP   79 (239)
T ss_pred             EEEEEECCHHHHHHHHHHH-----HHCCCEEEEECCHHHHHHHHHHC-CCCEEEECCCCCCCCCCHHHHHHHHH-CCCCC
T ss_conf             8999909999999999999-----98899999989999999999758-99899987899888873467778750-57877


Q ss_pred             EEEEECCCCHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHCCCC
Q ss_conf             89981687189999999765626431899989999976310233
Q gi|254780725|r  109 VIVIGDTNDVSLYRALISNHVSEYLIEPLSVADIINSISAIFTP  152 (427)
Q Consensus       109 Vivig~~~d~~l~r~l~r~Gv~dyl~~P~~~~~l~~ai~~~~~~  152 (427)
T Consensus        80 II~LTa~~~~~d~i~~l~~GADDYi~KPf~~~EL~aRI~allrR  123 (239)
T PRK09468         80 IIMLTAKGEEVDRIVGLEMGADDYLPKPFNPRELLARIRAVLRR  123 (239)
T ss_pred             EEEEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHH
T ss_conf             89994667878999999769868855899989999999999863