HHsearch alignment for GI: 254780725 and conserved domain: PRK09836

>PRK09836 DNA-binding transcriptional activator CusR; Provisional.
Probab=99.37  E-value=3.8e-11  Score=87.73  Aligned_cols=115  Identities=9%  Similarity=0.189  Sum_probs=96.2

Q ss_pred             EEEEECCHHHHHHHHHHHHHHHHHHCEEEEE-CCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEE
Q ss_conf             9998389899999998864110020223730-699899999986189984999980598767788999888532899808
Q gi|254780725|r   31 VHVFCVTDTLYSVVERSKIDPRMSQVNMRIT-RGSIAEAVSCFSDSSTPDLIIVQTKVDSREVLSALEPLAEVCDSGTKV  109 (427)
Q Consensus        31 ~~~f~~~~~~~~~~~~~~~drr~~~~~~~v~-~g~~~~A~~~~~~~~~P~~iivd~~~~~~~~~~~l~~la~~~~p~~~V  109 (427)
T Consensus         3 ILiVEDd~~l~~~l~~~-----L~~~G~~v~~a~~g~~a~~~~~~~-~~DlvilDi~lP~~~G~~l~~~iR~~-~~~~PI   75 (226)
T PRK09836          3 LLIVEDEKKTGEYLTKG-----LTEAGFVVDLADNGLNGYHLAMTG-DYDLIILDIMLPDVNGWDIVRMLRSA-NKGMPI   75 (226)
T ss_pred             EEEEECCHHHHHHHHHH-----HHHCCCEEEEECCHHHHHHHHHHC-CCCEEEECCCCCCCCCCCHHHHHHHH-CCCCEE
T ss_conf             99993999999999999-----987899999989999999998518-99999988999999872043567761-679609


Q ss_pred             EEEECCCCHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHCCCC
Q ss_conf             9981687189999999765626431899989999976310233
Q gi|254780725|r  110 IVIGDTNDVSLYRALISNHVSEYLIEPLSVADIINSISAIFTP  152 (427)
Q Consensus       110 ivig~~~d~~l~r~l~r~Gv~dyl~~P~~~~~l~~ai~~~~~~  152 (427)
T Consensus        76 I~Lta~~~~~d~i~~l~~GADDYl~KPf~~~EL~aRi~allrr  118 (226)
T PRK09836         76 LLLTALGTIEHRVKGLELGADDYLVKPFAFAELLARVRTLLRR  118 (226)
T ss_pred             EEEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCC
T ss_conf             9994458988999999769968863687679999999999662