HHsearch alignment for GI: 254780725 and conserved domain: PRK10070
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional.
Probab=91.60 E-value=0.98 Score=23.69 Aligned_cols=96 Identities=16% Similarity=0.140 Sum_probs=57.3
Q ss_pred CHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHCCCCCC-CCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEE
Q ss_conf 18999999976562643189998999997631023322-23456753799974698877568999999999962699499
Q gi|254780725|r 117 DVSLYRALISNHVSEYLIEPLSVADIINSISAIFTPQE-EGKGSSGCSISFIGSRGGVGSSTIAHNCAFSIASVFAMETL 195 (427)
Q Consensus 117 d~~l~r~l~r~Gv~dyl~~P~~~~~l~~ai~~~~~~~~-~~~~~~grvIav~g~KGGvGkTTiA~nLA~~LA~~~~~~Vl 195 (427)
T Consensus 17 ~~~~a~~~~~~g~~--------k~ei~~~tg~~vAv~dVsl~I~~GEi~~ivG-~SGsGKSTLlr~i~gL~~P-t~G~I~ 86 (400)
T PRK10070 17 HPQRAFKYIEQGLS--------KEQILEKTGLSLGVKDASLAIEEGEIFVIMG-LSGSGKSTMVRLLNRLIEP-TRGQVL 86 (400)
T ss_pred CHHHHHHHHHCCCC--------HHHHHHHHCCEEEEECCEEEECCCCEEEEEC-CCCCHHHHHHHHHHCCCCC-CCCEEE
T ss_conf 98999999876999--------8999986499998974076887999999999-9984699999999759998-981899
Q ss_pred EEECCCCCC-----------CCHH---HCCCCCCCCHHHHH
Q ss_conf 997879898-----------6033---43899878988863
Q gi|254780725|r 196 LADLDLPYG-----------TANI---NFDKDPINSISDAI 222 (427)
Q Consensus 196 LvDlDl~~g-----------~~~~---~l~~~~~~~l~d~l 222 (427)
T Consensus 87 i~G~di~~~~~~~l~~~rrr~igmVFQ~~aL~P~~TV~eNi 127 (400)
T PRK10070 87 IDGVDIAKISDAELREVRRKKIAMVFQSFALMPHMTVLDNT 127 (400)
T ss_pred ECCEECCCCCHHHHHHHHCCCEEEEECCCCCCCCCCHHHHH
T ss_conf 99999998997898765146559995797414388888878