HHsearch alignment for GI: 254780725 and conserved domain: PRK10336

>PRK10336 DNA-binding transcriptional regulator QseB; Provisional.
Probab=99.35  E-value=3.2e-11  Score=88.13  Aligned_cols=113  Identities=9%  Similarity=0.153  Sum_probs=94.7

Q ss_pred             EEECCHHHHHHHHHHHHHHHHHHCEEEEE-CCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEE
Q ss_conf             98389899999998864110020223730-69989999998618998499998059876778899988853289980899
Q gi|254780725|r   33 VFCVTDTLYSVVERSKIDPRMSQVNMRIT-RGSIAEAVSCFSDSSTPDLIIVQTKVDSREVLSALEPLAEVCDSGTKVIV  111 (427)
Q Consensus        33 ~f~~~~~~~~~~~~~~~drr~~~~~~~v~-~g~~~~A~~~~~~~~~P~~iivd~~~~~~~~~~~l~~la~~~~p~~~Viv  111 (427)
T Consensus         5 lVEDd~~l~~~l~~~-----L~~~g~~V~~a~~g~~a~~~~~~~-~~DlvilDi~lP~~dG~~l~~~iR~~-~~~~PII~   77 (219)
T PRK10336          5 LIEDDMLIGDGIKTG-----LSKMGFSVDWFTQGRQGKEALYSA-PYDAVILDLTLPGMDGRDILREWREK-GQREPVLI   77 (219)
T ss_pred             EEECCHHHHHHHHHH-----HHHCCCEEEEECCHHHHHHHHHCC-CCCEEEEECCCCCCCCCCCCCCHHHH-CCCCCEEE
T ss_conf             993899999999999-----998799999989999999998628-96999997999999856310104652-78887899


Q ss_pred             EECCCCHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHCCCC
Q ss_conf             81687189999999765626431899989999976310233
Q gi|254780725|r  112 IGDTNDVSLYRALISNHVSEYLIEPLSVADIINSISAIFTP  152 (427)
Q Consensus       112 ig~~~d~~l~r~l~r~Gv~dyl~~P~~~~~l~~ai~~~~~~  152 (427)
T Consensus        78 lta~~~~~d~i~~l~~GAdDYl~KPf~~~eL~ari~allrr  118 (219)
T PRK10336         78 LTARDALAERVEGLRLGADDYLCKPFALIEVAARLEALMRR  118 (219)
T ss_pred             EECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHH
T ss_conf             80689999999999769988868897679999999999611