HHsearch alignment for GI: 254780725 and conserved domain: PRK10336
>PRK10336 DNA-binding transcriptional regulator QseB; Provisional.
Probab=99.35 E-value=3.2e-11 Score=88.13 Aligned_cols=113 Identities=9% Similarity=0.153 Sum_probs=94.7
Q ss_pred EEECCHHHHHHHHHHHHHHHHHHCEEEEE-CCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEE
Q ss_conf 98389899999998864110020223730-69989999998618998499998059876778899988853289980899
Q gi|254780725|r 33 VFCVTDTLYSVVERSKIDPRMSQVNMRIT-RGSIAEAVSCFSDSSTPDLIIVQTKVDSREVLSALEPLAEVCDSGTKVIV 111 (427)
Q Consensus 33 ~f~~~~~~~~~~~~~~~drr~~~~~~~v~-~g~~~~A~~~~~~~~~P~~iivd~~~~~~~~~~~l~~la~~~~p~~~Viv 111 (427)
T Consensus 5 lVEDd~~l~~~l~~~-----L~~~g~~V~~a~~g~~a~~~~~~~-~~DlvilDi~lP~~dG~~l~~~iR~~-~~~~PII~ 77 (219)
T PRK10336 5 LIEDDMLIGDGIKTG-----LSKMGFSVDWFTQGRQGKEALYSA-PYDAVILDLTLPGMDGRDILREWREK-GQREPVLI 77 (219)
T ss_pred EEECCHHHHHHHHHH-----HHHCCCEEEEECCHHHHHHHHHCC-CCCEEEEECCCCCCCCCCCCCCHHHH-CCCCCEEE
T ss_conf 993899999999999-----998799999989999999998628-96999997999999856310104652-78887899
Q ss_pred EECCCCHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHCCCC
Q ss_conf 81687189999999765626431899989999976310233
Q gi|254780725|r 112 IGDTNDVSLYRALISNHVSEYLIEPLSVADIINSISAIFTP 152 (427)
Q Consensus 112 ig~~~d~~l~r~l~r~Gv~dyl~~P~~~~~l~~ai~~~~~~ 152 (427)
T Consensus 78 lta~~~~~d~i~~l~~GAdDYl~KPf~~~eL~ari~allrr 118 (219)
T PRK10336 78 LTARDALAERVEGLRLGADDYLCKPFALIEVAARLEALMRR 118 (219)
T ss_pred EECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHH
T ss_conf 80689999999999769988868897679999999999611