HHsearch alignment for GI: 254780725 and conserved domain: PRK10360

>PRK10360 DNA-binding transcriptional activator UhpA; Provisional.
Probab=99.00  E-value=2.5e-08  Score=70.40  Aligned_cols=108  Identities=15%  Similarity=0.135  Sum_probs=85.0

Q ss_pred             CHHHHHHHHHHHHHHHHHHCEEEEECCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEECCC
Q ss_conf             98999999988641100202237306998999999861899849999805987677889998885328998089981687
Q gi|254780725|r   37 TDTLYSVVERSKIDPRMSQVNMRITRGSIAEAVSCFSDSSTPDLIIVQTKVDSREVLSALEPLAEVCDSGTKVIVIGDTN  116 (427)
Q Consensus        37 ~~~~~~~~~~~~~drr~~~~~~~v~~g~~~~A~~~~~~~~~P~~iivd~~~~~~~~~~~l~~la~~~~p~~~Vivig~~~  116 (427)
T Consensus        10 h~l~r~gl~~~l~~--~~~~~vv~~~~~~~~~l~~~~~~-~~dvvllD~~mp~~~g~~~~~~l~----~~~~vivls~~~   82 (196)
T PRK10360         10 HLIVRSGFAQLLGL--EPDLQVVAEFGSGREALAGLPGR-GVQVCICDISMPDISGLELLSQLP----KGMATIMLSVHD   82 (196)
T ss_pred             CHHHHHHHHHHHHC--CCCEEEEEEECCHHHHHHHHHHC-CCCEEEECCCCCCCCCHHHHHHHH----CCCCEEEEEECC
T ss_conf             79999999999812--99959999989999999988744-999999878878862077999984----387489997307


Q ss_pred             CHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHCCC
Q ss_conf             18999999976562643189998999997631023
Q gi|254780725|r  117 DVSLYRALISNHVSEYLIEPLSVADIINSISAIFT  151 (427)
Q Consensus       117 d~~l~r~l~r~Gv~dyl~~P~~~~~l~~ai~~~~~  151 (427)
T Consensus        83 ~~~~~~~a~~~Ga~g~l~K~~~~~el~~aI~~v~~  117 (196)
T PRK10360         83 SPALVEQALNAGARGFLSKRCSPDELIAAVHTVAT  117 (196)
T ss_pred             CHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHC
T ss_conf             59999999975998899778999999999999986