HHsearch alignment for GI: 254780725 and conserved domain: PRK10529

>PRK10529 DNA-binding transcriptional activator KdpE; Provisional.
Probab=99.19  E-value=4e-10  Score=81.42  Aligned_cols=114  Identities=16%  Similarity=0.271  Sum_probs=93.5

Q ss_pred             EEEEECCHHHHHHHHHHHHHHHHHHCEEEE-ECCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEE
Q ss_conf             999838989999999886411002022373-0699899999986189984999980598767788999888532899808
Q gi|254780725|r   31 VHVFCVTDTLYSVVERSKIDPRMSQVNMRI-TRGSIAEAVSCFSDSSTPDLIIVQTKVDSREVLSALEPLAEVCDSGTKV  109 (427)
Q Consensus        31 ~~~f~~~~~~~~~~~~~~~drr~~~~~~~v-~~g~~~~A~~~~~~~~~P~~iivd~~~~~~~~~~~l~~la~~~~p~~~V  109 (427)
T Consensus         4 ILivEDd~~l~~~l~~~-----L~~~g~~V~~a~~~~~al~~~~~~-~~DlviLDi~lP~~dG~~l~~~iR~~--~~~pI   75 (225)
T PRK10529          4 VLIVEDEQAIRRFLRTA-----LEGDGMRVFEAETLQRGLLEAATR-KPDLIILDLGLPDGDGIEFIRDLRQW--SAIPV   75 (225)
T ss_pred             EEEEECCHHHHHHHHHH-----HHHCCCEEEEECCHHHHHHHHHHC-CCCEEEEECCCCCCCCCCCEEEEECC--CCCCE
T ss_conf             99997989999999999-----998899999979999999986117-99899980788888876331000127--99878


Q ss_pred             EEEECCCCHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHCCCC
Q ss_conf             9981687189999999765626431899989999976310233
Q gi|254780725|r  110 IVIGDTNDVSLYRALISNHVSEYLIEPLSVADIINSISAIFTP  152 (427)
Q Consensus       110 ivig~~~d~~l~r~l~r~Gv~dyl~~P~~~~~l~~ai~~~~~~  152 (427)
T Consensus        76 I~lta~~~~~d~i~~l~~GADDYl~KPf~~~eL~aRi~a~lrr  118 (225)
T PRK10529         76 IVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRR  118 (225)
T ss_pred             EEEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHH
T ss_conf             9995468989999999769876540785459999999999714