HHsearch alignment for GI: 254780725 and conserved domain: PRK10693

>PRK10693 response regulator of RpoS; Provisional.
Probab=99.46  E-value=6.4e-12  Score=92.46  Aligned_cols=119  Identities=18%  Similarity=0.230  Sum_probs=93.9

Q ss_pred             CCCCEEEEEEECCHHHHHHHHHHHHHHHHHHCEEE-EECCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHC
Q ss_conf             18730599983898999999988641100202237-30699899999986189984999980598767788999888532
Q gi|254780725|r   25 SLPRISVHVFCVTDTLYSVVERSKIDPRMSQVNMR-ITRGSIAEAVSCFSDSSTPDLIIVQTKVDSREVLSALEPLAEVC  103 (427)
Q Consensus        25 ~~~~~~~~~f~~~~~~~~~~~~~~~drr~~~~~~~-v~~g~~~~A~~~~~~~~~P~~iivd~~~~~~~~~~~l~~la~~~  103 (427)
T Consensus         4 pl~gkkILIVDDd~~~r~~l~~~L-----~~~G~~V~~A~nG~eAl~~l~~~-~pDLIi~Dl~MP~mdGlell~~lr~~-   76 (337)
T PRK10693          4 PLVGKQILIVEDEPVFRSLLDSWF-----SSLGATTVLAADGVDALELLGGF-TPDLMICDIAMPRMNGLKFVEHLRNR-   76 (337)
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHH-----HHCCCEEEEECCHHHHHHHHHCC-CCCEEEEECCCCCCCHHHHHHHHHHH-
T ss_conf             888998999949999999999999-----97899999989999999998658-99999996899999989999999985-


Q ss_pred             CCCCEEEEEECCCCHHHHHHHHHCCCCEEECCCC-CHHHHHHHHHHCC
Q ss_conf             8998089981687189999999765626431899-9899999763102
Q gi|254780725|r  104 DSGTKVIVIGDTNDVSLYRALISNHVSEYLIEPL-SVADIINSISAIF  150 (427)
Q Consensus       104 ~p~~~Vivig~~~d~~l~r~l~r~Gv~dyl~~P~-~~~~l~~ai~~~~  150 (427)
T Consensus        77 ~~~~PVIvlTa~~~~~d~v~al~~GA~DyL~KPI~d~~~Lr~~v~a~l  124 (337)
T PRK10693         77 GDQTPVLVISATENMADIAKALRLGVEDVLLKPVKDLNRLREAVFACL  124 (337)
T ss_pred             CCCCEEEEEECCCCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHH
T ss_conf             899649999868999999999974995899789699999999999875