HHsearch alignment for GI: 254780725 and conserved domain: PRK10701
>PRK10701 DNA-binding transcriptional regulator RstA; Provisional.
Probab=99.20 E-value=2.7e-10 Score=82.45 Aligned_cols=114 Identities=8% Similarity=0.136 Sum_probs=90.0
Q ss_pred EEEEECCHHHHHHHHHHHHHHHHHHCEEEEE-CCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEE
Q ss_conf 9998389899999998864110020223730-699899999986189984999980598767788999888532899808
Q gi|254780725|r 31 VHVFCVTDTLYSVVERSKIDPRMSQVNMRIT-RGSIAEAVSCFSDSSTPDLIIVQTKVDSREVLSALEPLAEVCDSGTKV 109 (427)
Q Consensus 31 ~~~f~~~~~~~~~~~~~~~drr~~~~~~~v~-~g~~~~A~~~~~~~~~P~~iivd~~~~~~~~~~~l~~la~~~~p~~~V 109 (427)
T Consensus 4 ILlVEDd~~l~~~l~~~-----L~~~g~~v~~a~~g~~a~~~~~~~-~~DlvilDi~LP~~dG~~l~~~iR~~--~~~Pi 75 (240)
T PRK10701 4 IVFVEDDAEVGSLIAAY-----LAKHDIDVTVEPRGDRAEETILRE-QPDLVLLDIMLPGKDGMTICRDLRPK--WSGPI 75 (240)
T ss_pred EEEEECCHHHHHHHHHH-----HHHCCCEEEEECCHHHHHHHHHHC-CCCEEEEECCCCCCCCCEEEEECCCC--CCCCE
T ss_conf 99997999999999999-----988799999989999999998617-99999992899767887876311025--89878
Q ss_pred EEEECCCCHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHCCCC
Q ss_conf 9981687189999999765626431899989999976310233
Q gi|254780725|r 110 IVIGDTNDVSLYRALISNHVSEYLIEPLSVADIINSISAIFTP 152 (427)
Q Consensus 110 ivig~~~d~~l~r~l~r~Gv~dyl~~P~~~~~l~~ai~~~~~~ 152 (427)
T Consensus 76 I~lta~~~~~d~v~gl~~GADDYl~KPf~~~eL~aRi~a~lrr 118 (240)
T PRK10701 76 VLLTSLDSDMNHILALEMGACDYILKTTPPAVLLARLRLHLRQ 118 (240)
T ss_pred EEEEECCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHH
T ss_conf 9994057578899999768877641799879999999999965