HHsearch alignment for GI: 254780725 and conserved domain: PRK10867
>PRK10867 signal recognition particle protein; Provisional.
Probab=98.39 E-value=6.8e-05 Score=49.25 Aligned_cols=173 Identities=10% Similarity=0.094 Sum_probs=99.8
Q ss_pred EEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHCCCCCCCCHHHHHCCCCCHHHHHHHHHHHCCC
Q ss_conf 37999746988775689999999999626994999978798986033438998789888631845612433765320248
Q gi|254780725|r 162 CSISFIGSRGGVGSSTIAHNCAFSIASVFAMETLLADLDLPYGTANINFDKDPINSISDAIYPVGRIDKAFVSRLPVFYA 241 (427)
Q Consensus 162 rvIav~g~KGGvGkTTiA~nLA~~LA~~~~~~VlLvDlDl~~g~~~~~l~~~~~~~l~d~l~~~~rlD~~~l~~~l~~~~ 241 (427)
T Consensus 101 ~VIm~vG-LqGsGKTTT~aKLA~~lk~k~~k~vllvaaDt~RpaA~eQL-----------------------~~la~~-- 154 (453)
T PRK10867 101 AVVLMAG-LQGAGKTTSVGKLGKFLREKHKKKVLVVSADVYRPAAIKQL-----------------------ETLAEQ-- 154 (453)
T ss_pred EEEEEEC-CCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHH-----------------------HHHHHH--
T ss_conf 6999974-68885185899999999973898379855887705899999-----------------------999985--
Q ss_pred CCEEEEECCCCCCCHHCCCHHHHHHHHH-HHHHCCCEEEECCCCCCCHHH--------HHHHHHCCCCCCCCCCCHHHHH
Q ss_conf 9806872487612032079999999899-985128889973888889899--------9998620125435787768899
Q gi|254780725|r 242 ENLSILTAPAMLSRTYDFDEKMIVPVLD-ILEQIFPLVILDVPHVWNSWT--------QEVLTLSDKVVITTSLDLAGLR 312 (427)
Q Consensus 242 ~gL~lL~a~~~~~~~~~~~~~~l~~ll~-~l~~~yd~VIiD~p~~~~~~~--------~~~L~~AD~vviV~~p~~~slr 312 (427)
T Consensus 155 ~~v~~~~~~~~~d-p~~i----a~~a~~~ak~~~~DvvivDTAGRl~~d~~Lm~El~~i~~~~~P~e~llV~Da~~G--Q 227 (453)
T PRK10867 155 VGVDFFPSDVGQK-PVDI----VNAALKEAKLKFYDVLLVDTAGRLHVDEAMMDEIKQVHASINPVETLFVVDAMTG--Q 227 (453)
T ss_pred CCCCEECCCCCCC-HHHH----HHHHHHHHHHCCCCEEEEECCCCHHCCHHHHHHHHHHHHHHCCCCEEEEEECCCC--H
T ss_conf 1980436788998-8999----9999999997799999997876012108889999999876378713797432235--6
Q ss_pred HHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCEEE---------EECCCHHHHH
Q ss_conf 9999999999819876753899956589875200599999984895379---------9068799999
Q gi|254780725|r 313 NSKNLIDVLKKLRPADKPPYLVLNQVKTPKKPEISISDFCAPLGITPSA---------IIPFDGAVFG 371 (427)
Q Consensus 313 ~a~~ll~~l~~~~~~~~~~~iVlNr~~~~~~~~i~~~~~~~~lg~~~~~---------~IP~D~~~~~ 371 (427)
T Consensus 228 ~a~~~a~~F~~~~---~~~gvIlTKlDgdarGG~al-S~~~~t~~PI~FiG~GEk~ddle~F~p~r~a 291 (453)
T PRK10867 228 DAANTAKAFNEAL---PLTGVVLTKVDGDARGGAAL-SIRHITGKPIKFLGVGEKTDALEPFHPDRIA 291 (453)
T ss_pred HHHHHHHHHHHHC---CCCEEEEECCCCCCCCHHHH-HHHHHHCCCCEEEECCCCCCCCCCCCHHHHH
T ss_conf 6899999999855---98707875046787613898-9999978696788669982458876848999