HHsearch alignment for GI: 254780725 and conserved domain: PRK11083

>PRK11083 DNA-binding response regulator CreB; Provisional.
Probab=99.42  E-value=2.2e-11  Score=89.20  Aligned_cols=117  Identities=11%  Similarity=0.163  Sum_probs=96.2

Q ss_pred             EEEEEECCHHHHHHHHHHHHHHHHHHCEEEEE-CCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCE
Q ss_conf             59998389899999998864110020223730-69989999998618998499998059876778899988853289980
Q gi|254780725|r   30 SVHVFCVTDTLYSVVERSKIDPRMSQVNMRIT-RGSIAEAVSCFSDSSTPDLIIVQTKVDSREVLSALEPLAEVCDSGTK  108 (427)
Q Consensus        30 ~~~~f~~~~~~~~~~~~~~~drr~~~~~~~v~-~g~~~~A~~~~~~~~~P~~iivd~~~~~~~~~~~l~~la~~~~p~~~  108 (427)
T Consensus         5 kILiVEDd~~l~~~l~~~-----L~~~g~~v~~~~~~~~al~~~~~~-~~DlvilDi~LP~~~G~~l~~~iR~~-~~~~p   77 (229)
T PRK11083          5 TILLVEDEQAIADTLVYA-----LQSEGFTVEWFERGLPALDKLRQQ-PPDLVILDVGLPDISGFELCRQLRAF-HPALP   77 (229)
T ss_pred             EEEEEECCHHHHHHHHHH-----HHHCCCEEEEECCHHHHHHHHHHC-CCCEEEECCCCCCCCHHHHHHHHHHH-CCCCE
T ss_conf             999996999999999999-----998899999989999999999718-99899973889998768899999970-89972


Q ss_pred             EEEEECCCCHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHCCCCC
Q ss_conf             899816871899999997656264318999899999763102332
Q gi|254780725|r  109 VIVIGDTNDVSLYRALISNHVSEYLIEPLSVADIINSISAIFTPQ  153 (427)
Q Consensus       109 Vivig~~~d~~l~r~l~r~Gv~dyl~~P~~~~~l~~ai~~~~~~~  153 (427)
T Consensus        78 II~lta~~~~~d~i~~l~~GADDYl~KPf~~~EL~aRi~a~lrR~  122 (229)
T PRK11083         78 VIFLTARSDEVDRLVGLEIGADDYVAKPFSPREVAARVRTILRRV  122 (229)
T ss_pred             EEEEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHH
T ss_conf             999836789899999997599877308742899999999999764