HHsearch alignment for GI: 254780725 and conserved domain: PRK11173

>PRK11173 two-component response regulator; Provisional.
Probab=99.17  E-value=1.1e-09  Score=78.64  Aligned_cols=116  Identities=10%  Similarity=0.149  Sum_probs=92.5

Q ss_pred             CCEEEEEEECCHHHHHHHHHHHHHHHHHHCEEEE-ECCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCC
Q ss_conf             7305999838989999999886411002022373-069989999998618998499998059876778899988853289
Q gi|254780725|r   27 PRISVHVFCVTDTLYSVVERSKIDPRMSQVNMRI-TRGSIAEAVSCFSDSSTPDLIIVQTKVDSREVLSALEPLAEVCDS  105 (427)
Q Consensus        27 ~~~~~~~f~~~~~~~~~~~~~~~drr~~~~~~~v-~~g~~~~A~~~~~~~~~P~~iivd~~~~~~~~~~~l~~la~~~~p  105 (427)
T Consensus         4 ~~ILi--VEDD~~~~~~l~~~-----L~~~G~~V~~a~~~~ea~~~l~~~-~~DlvilDi~lp~~~G~~l~~~iR~~--~   73 (237)
T PRK11173          4 PHILI--VEDELVTRNTLKSI-----FEAEGYDVFEATDGAEMHQILSEN-DINLVIMDINLPGKNGLLLARELREQ--A   73 (237)
T ss_pred             CEEEE--EECCHHHHHHHHHH-----HHHCCCEEEEECCHHHHHHHHHCC-CCCEEEEECCCCCCCCHHHHHHHHHC--C
T ss_conf             98999--95989999999999-----998899999989999999998638-99899993899988730355566516--8


Q ss_pred             CCEEEEEECCCCHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHCCCC
Q ss_conf             98089981687189999999765626431899989999976310233
Q gi|254780725|r  106 GTKVIVIGDTNDVSLYRALISNHVSEYLIEPLSVADIINSISAIFTP  152 (427)
Q Consensus       106 ~~~Vivig~~~d~~l~r~l~r~Gv~dyl~~P~~~~~l~~ai~~~~~~  152 (427)
T Consensus        74 ~~piI~lta~~~~~~~i~~l~~GaddYi~KPf~~~EL~arv~~~l~r  120 (237)
T PRK11173         74 NVALMFLTGRDNEVDKILGLEIGADDYITKPFNPRELTIRARNLLSR  120 (237)
T ss_pred             CCCEEEEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHH
T ss_conf             84789994325778899999769767887898879999999999866