HHsearch alignment for GI: 254780725 and conserved domain: PRK11519

Probab=99.93  E-value=2.1e-24  Score=169.22  Aligned_cols=175  Identities=14%  Similarity=0.177  Sum_probs=150.0

Q ss_pred             CCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHCCCCCCCCHHHHHCCCCCHHHHHHHHHH
Q ss_conf             56753799974698877568999999999962699499997879898603343899878988863184561243376532
Q gi|254780725|r  158 GSSGCSISFIGSRGGVGSSTIAHNCAFSIASVFAMETLLADLDLPYGTANINFDKDPINSISDAIYPVGRIDKAFVSRLP  237 (427)
Q Consensus       158 ~~~grvIav~g~KGGvGkTTiA~nLA~~LA~~~~~~VlLvDlDl~~g~~~~~l~~~~~~~l~d~l~~~~rlD~~~l~~~l  237 (427)
T Consensus       523 ~~~~~vi~vTS~~pgEGKSt~a~nLA~~~A~-~G~rvLLID~DlRrp~l~~~~~~~~~~GLs~~L~g~~~~~~~-----i  596 (720)
T PRK11519        523 QAQNNVLMMTGVSPSIGKTFVCANLAAVISQ-TNKRVLLIDCDMRKGYTHELLGTNNVNGLSEILIGQGDITTA-----A  596 (720)
T ss_pred             CCCCCEEEEEECCCCCCHHHHHHHHHHHHHH-CCCEEEEEECCCCCCHHHHHCCCCCCCCHHHHCCCCCCHHHH-----C
T ss_conf             8887679997089999789999999999983-799199993877770167753999999859980799978997-----0


Q ss_pred             HCC-CCCEEEEECCC-CCCCHHCCCHHHHHHHHHHHHHCCCEEEECCCCCCC-HHHHHHHHHCCCCCCCCCCCHHHHHHH
Q ss_conf             024-89806872487-612032079999999899985128889973888889-899999862012543578776889999
Q gi|254780725|r  238 VFY-AENLSILTAPA-MLSRTYDFDEKMIVPVLDILEQIFPLVILDVPHVWN-SWTQEVLTLSDKVVITTSLDLAGLRNS  314 (427)
Q Consensus       238 ~~~-~~gL~lL~a~~-~~~~~~~~~~~~l~~ll~~l~~~yd~VIiD~p~~~~-~~~~~~L~~AD~vviV~~p~~~slr~a  314 (427)
T Consensus       597 ~~~~~~~l~vl~~G~~~pnp~elL~s~~~~~ll~~l~~~yD~IIiDtpPv~~v~Da~~la~~aD~~l~Vvr~g~t~~~~v  676 (720)
T PRK11519        597 KPTSIANFDLIPRGQVPPNPSELLMSERFAELVAWASKNYDLVLIDTPPILAVTDAAIVGRHVGTTLMVARYAVNTLKEV  676 (720)
T ss_pred             CCCCCCCEEEECCCCCCCCHHHHHCCHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHCCEEEEEEECCCCCHHHH
T ss_conf             35798998997699999498998387599999999985299999939996523589999997897999998995789999


Q ss_pred             HHHHHHHHHCCCCCCCCEEEEECCCC
Q ss_conf             99999999819876753899956589
Q gi|254780725|r  315 KNLIDVLKKLRPADKPPYLVLNQVKT  340 (427)
Q Consensus       315 ~~ll~~l~~~~~~~~~~~iVlNr~~~  340 (427)
T Consensus       677 ~~a~~~l~~~~~--~v~G~VlN~v~~  700 (720)
T PRK11519        677 ETSLSRFEQNGI--PVKGVILNSIFR  700 (720)
T ss_pred             HHHHHHHHHCCC--CEEEEEECCCCC
T ss_conf             999999996899--748999889766