HHsearch alignment for GI: 254780725 and conserved domain: PRK13234

>PRK13234 nifH nitrogenase reductase; Reviewed.
Probab=99.98  E-value=4.5e-30  Score=204.05  Aligned_cols=257  Identities=13%  Similarity=0.162  Sum_probs=199.3

Q ss_pred             CEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHCCCCCCCCHHHHHCCCCCHHHHHHHHHHHCC
Q ss_conf             53799974698877568999999999962699499997879898603343899878988863184561243376532024
Q gi|254780725|r  161 GCSISFIGSRGGVGSSTIAHNCAFSIASVFAMETLLADLDLPYGTANINFDKDPINSISDAIYPVGRIDKAFVSRLPVFY  240 (427)
Q Consensus       161 grvIav~g~KGGvGkTTiA~nLA~~LA~~~~~~VlLvDlDl~~g~~~~~l~~~~~~~l~d~l~~~~rlD~~~l~~~l~~~  240 (427)
T Consensus         4 mr~IAiYG-KGGIGKSTtssNlsAAlA~-~G~rVl~IGCDPK~DSTr~Llgg~~~~Tvld~~~~~~~~ed~~ledvv~~G   81 (293)
T PRK13234          4 LRQIAFYG-KGGIGKSTTSQNTLAALVE-MGQKILIVGCDPKADSTRLILNAKAQDTVLSLAAEAGSVEDLELEDVMKIG   81 (293)
T ss_pred             CCEEEEEC-CCCCCHHHHHHHHHHHHHH-CCCEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHCCCCCCCCHHHHHHCC
T ss_conf             75799977-9844587789999999997-799699974898316568762899997088998764981215387897437


Q ss_pred             CCCEEEEECCCCCCCHHCCCHHHHHHHHHHHHH-----CCCEEEECCCCC-CCHHHHHHH--HHCCCCCCCCCCCHHHHH
Q ss_conf             898068724876120320799999998999851-----288899738888-898999998--620125435787768899
Q gi|254780725|r  241 AENLSILTAPAMLSRTYDFDEKMIVPVLDILEQ-----IFPLVILDVPHV-WNSWTQEVL--TLSDKVVITTSLDLAGLR  312 (427)
Q Consensus       241 ~~gL~lL~a~~~~~~~~~~~~~~l~~ll~~l~~-----~yd~VIiD~p~~-~~~~~~~~L--~~AD~vviV~~p~~~slr  312 (427)
T Consensus        82 ~~gI~CVEsGGP-ePGvGCAGRGIitai~~Le~lga~ed~D~V~yDVLGDVVCGGFAmPir~g~A~evyIVtSge~msly  160 (293)
T PRK13234         82 YKGIKCVESGGP-EPGVGCAGRGVITSINFLEENGAYDDVDYVSYDVLGDVVCGGFAMPIRENKAQEIYIVMSGEMMALY  160 (293)
T ss_pred             CCCEEEEECCCC-CCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHH
T ss_conf             798489768998-9988877713146788887718765799999956776651475566545887689999467187999


Q ss_pred             HHHHHHHHHHHC--CCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHCCCCEEEECCCCHHH
Q ss_conf             999999999981--987675389995658987520059999998489537990687999999884796189888999899
Q gi|254780725|r  313 NSKNLIDVLKKL--RPADKPPYLVLNQVKTPKKPEISISDFCAPLGITPSAIIPFDGAVFGMSANSGKMIHEVDPKSAIA  390 (427)
Q Consensus       313 ~a~~ll~~l~~~--~~~~~~~~iVlNr~~~~~~~~i~~~~~~~~lg~~~~~~IP~D~~~~~~A~~~G~pi~e~~p~s~~a  390 (427)
T Consensus       161 AANnI~~~i~~~~~~g~~rlgGlI~N~r~~~~e-~~~v~~fa~~~gt~ii~~IPrs~-~v~~aE~~~~TviE~~P~s~~A  238 (293)
T PRK13234        161 AANNIAKGILKYANSGGVRLGGLICNERQTDRE-LELAEALAKRLGSKLIHFVPRDN-IVQHAELRRMTVIEYAPDSKQA  238 (293)
T ss_pred             HHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCH-HHHHHHHHHHHCCCEEEECCCCH-HHHHHHHCCCEEEEECCCCHHH
T ss_conf             999999999998632696246899717898537-99999999984993799779968-8999997397778968898799


Q ss_pred             HHHHHHHHHHHCCC-CCCCCCCCHHHHHHHHHH
Q ss_conf             99999999985221-223211105899998742
Q gi|254780725|r  391 NLLVDFSRVLMGRV-TVSKPQSAMYTKIKKIFN  422 (427)
Q Consensus       391 ~~~~~La~~i~gr~-~~~~~k~~~~~~l~~lf~  422 (427)
T Consensus       239 ~~Yr~LA~~I~~n~~~~~iP~Pl~~~eL~~l~~  271 (293)
T PRK13234        239 GEYRALAEKIHANSGKGTIPTPITMEELEDMLM  271 (293)
T ss_pred             HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
T ss_conf             999999999984788700188899899999999