HHsearch alignment for GI: 254780725 and conserved domain: PTZ00099

>PTZ00099 rab6; Provisional.
Probab=94.98  E-value=0.27  Score=27.16  Aligned_cols=113  Identities=16%  Similarity=0.150  Sum_probs=78.8

Q ss_pred             CCCEEEECCCCC--CCHHHHHHHHHCCCCCCCCCCC-HHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHH
Q ss_conf             288899738888--8989999986201254357877-6889999999999998198767538999565898752005999
Q gi|254780725|r  274 IFPLVILDVPHV--WNSWTQEVLTLSDKVVITTSLD-LAGLRNSKNLIDVLKKLRPADKPPYLVLNQVKTPKKPEISISD  350 (427)
Q Consensus       274 ~yd~VIiD~p~~--~~~~~~~~L~~AD~vviV~~p~-~~slr~a~~ll~~l~~~~~~~~~~~iVlNr~~~~~~~~i~~~~  350 (427)
T Consensus        28 ~v~l~IWDTAGqE~f~sl~~~y~r~a~~~ilVyDit~~~SF~~l~~W~~~i~~~~~~~~~iiLVGNK~DL~~~r~V~~ee  107 (176)
T PTZ00099         28 PVRLQLWDTAGQERFRSLIPSYIRDSAAAIVVYDITNRQSFENTTKWIQDILNERGKDVIIALVGNKTDLGDLRKVTYEE  107 (176)
T ss_pred             EEEEEEEECCCCCCHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHCCCCHHH
T ss_conf             99999997998634135768870798679998504207789999999999998538877439998556558616859999


Q ss_pred             HHHHHCCCEEEEECCCHHHHHHHHHCCCCEEEECCCC--HHHHHHHHHHHHHHCCC
Q ss_conf             9998489537990687999999884796189888999--89999999999985221
Q gi|254780725|r  351 FCAPLGITPSAIIPFDGAVFGMSANSGKMIHEVDPKS--AIANLLVDFSRVLMGRV  404 (427)
Q Consensus       351 ~~~~lg~~~~~~IP~D~~~~~~A~~~G~pi~e~~p~s--~~a~~~~~La~~i~gr~  404 (427)
T Consensus       108 ------------------~~~~A~~~~~~f~EtSAktg~nV~e~F~~la~~i~~~~  145 (176)
T PTZ00099        108 ------------------GMQKAQEYNTMFHETSAKAGHNIKVLFKKIAAKLPNLD  145 (176)
T ss_pred             ------------------HHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHCCHH
T ss_conf             ------------------99999985999999848999498999999999860802