HHsearch alignment for GI: 254780725 and conserved domain: TIGR00345
>TIGR00345 arsA arsenite-activated ATPase (arsA); InterPro: IPR003348 This ATPase is involved in the removal of arsenate, antimonite, and arsenate from the cell. In Escherichia coli an anion-translocating ATPase has been identified as the product of the arsenical resistance operon of resistance plasmid R773. This ATP-driven oxyanion pump catalyses extrusion of the oxyanions arsenite, antimonite and arsenate. Maintenance of a low intracellular concentration of oxyanion produces resistance to the toxic agents. The pump is composed of two polypeptides, the products of the arsA and arsB genes. This two-subunit enzyme produces resistance to arsenite and antimonite. A third gene, arsC, expands the substrate specificity to allow for arsenate pumping and resistance . The ArsA and ArsB proteins form a membrane-bound pump that functions as an oxyanion-translocating ATPase. The ArsC protein is an arsenate reductase that reduces arsenate to arsenite, which is subsequently pumped out of the cell .; GO: 0005524 ATP binding, 0006820 anion transport, 0016020 membrane.
Probab=99.38 E-value=1.8e-12 Score=95.81 Aligned_cols=171 Identities=21% Similarity=0.258 Sum_probs=95.0
Q ss_pred EEECCCCCCHHHHHHHHHHHHHHH-CCCCEEEEECCCCCCCCHHHCCCCCCCCHH-----HHHCCCCCHHH---------
Q ss_conf 974698877568999999999962-699499997879898603343899878988-----86318456124---------
Q gi|254780725|r 166 FIGSRGGVGSSTIAHNCAFSIASV-FAMETLLADLDLPYGTANINFDKDPINSIS-----DAIYPVGRIDK--------- 230 (427)
Q Consensus 166 v~g~KGGvGkTTiA~nLA~~LA~~-~~~~VlLvDlDl~~g~~~~~l~~~~~~~l~-----d~l~~~~rlD~--------- 230 (427)
T Consensus 1 f~gGKGGVGKTt~SaAtA~~lAe~qPGkkvLl~STDPAH-sL~D~F~~e~G~~~~kv~g~eNL~~~-EIDp~~al~~y~~ 78 (330)
T TIGR00345 1 FFGGKGGVGKTTISAATAIRLAEQQPGKKVLLVSTDPAH-SLSDVFEQELGHEPTKVKGVENLSAV-EIDPQAALEEYRA 78 (330)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCH-HHHHHHHHHHCCCCCEEECCCCCEEE-EECHHHHHHHHHH
T ss_conf 977878823888999999999851899779998408600-27886113217773032058985555-1037899998799
Q ss_pred ---HHHHHHHHCCCCCE-EEEEC-------C----CCCCCHHCCCHHHHHHHHHHHH-HC---CCEEEECCCC-------
Q ss_conf ---33765320248980-68724-------8----7612032079999999899985-12---8889973888-------
Q gi|254780725|r 231 ---AFVSRLPVFYAENL-SILTA-------P----AMLSRTYDFDEKMIVPVLDILE-QI---FPLVILDVPH------- 284 (427)
Q Consensus 231 ---~~l~~~l~~~~~gL-~lL~a-------~----~~~~~~~~~~~~~l~~ll~~l~-~~---yd~VIiD~p~------- 284 (427)
T Consensus 79 rvf~~~~~i~~~~~~~~~~~l~~ql~~~~~~dltGsiPGiDE~~~F~~~~k~~~~~~~~e~etyD~vIfDTAPTGHTLRL 158 (330)
T TIGR00345 79 RVFKLKEQIKQNLSLGVVDMLEDQLEGAALSDLTGSIPGIDEIAAFDEFLKHMDEAELNERETYDVVIFDTAPTGHTLRL 158 (330)
T ss_pred HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHH
T ss_conf 99999999860678873202799999877775227998588999999999876543215676234688716974677753
Q ss_pred -----CCCHHHH-------------------------------------------------HHHHH--CCCCCCCCCCCH
Q ss_conf -----8898999-------------------------------------------------99862--012543578776
Q gi|254780725|r 285 -----VWNSWTQ-------------------------------------------------EVLTL--SDKVVITTSLDL 308 (427)
Q Consensus 285 -----~~~~~~~-------------------------------------------------~~L~~--AD~vviV~~p~~ 308 (427)
T Consensus 159 L~lP~~~~~~~~~~~k~~~~~g~~~~~~~~~Lpf~G~~~~l~~~~~l~~~~e~Ke~~~~~~~~l~DP~~T~f~~V~~pE~ 238 (330)
T TIGR00345 159 LQLPEVLSKFLEKFIKLREKLGPMLKLFKELLPFMGAGESLEDDEALEKLEELKEQIEAAREVLSDPERTSFVLVVIPEK 238 (330)
T ss_pred HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCC
T ss_conf 10023679999874356777889887664105789898878778999989999999999999724998516888860262
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCEEEEECCCC
Q ss_conf 88999999999999819876753899956589
Q gi|254780725|r 309 AGLRNSKNLIDVLKKLRPADKPPYLVLNQVKT 340 (427)
Q Consensus 309 ~slr~a~~ll~~l~~~~~~~~~~~iVlNr~~~ 340 (427)
T Consensus 239 ~~l~E~~R~~~~L~~Y~~~~~--~vIvN~vLP 268 (330)
T TIGR00345 239 MSLYESERAHKELKKYGIKVD--AVIVNQVLP 268 (330)
T ss_pred CCHHHHHHHHHHHHHCCCCCC--EEEECCCCC
T ss_conf 427899999999986498504--478702257