HHsearch alignment for GI: 254780725 and conserved domain: TIGR00455

>TIGR00455 apsK adenylylsulfate kinase; InterPro: IPR002891 Enzyme that catalyses the phosphorylation of adenylylsulphate to 3'-phosphoadenylylsulphate. This domain contains an ATP binding P-loop motif .; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity transferring phosphorus-containing groups, 0000103 sulfate assimilation.
Probab=96.79  E-value=0.019  Score=34.22  Aligned_cols=114  Identities=22%  Similarity=0.208  Sum_probs=74.2

Q ss_pred             CCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHCCCCCCCCHHHHHCCCCCHHHHHHHHH
Q ss_conf             45675379997469887756899999999996269949999787989860334389987898886318456124337653
Q gi|254780725|r  157 KGSSGCSISFIGSRGGVGSSTIAHNCAFSIASVFAMETLLADLDLPYGTANINFDKDPINSISDAIYPVGRIDKAFVSRL  236 (427)
Q Consensus       157 ~~~~grvIav~g~KGGvGkTTiA~nLA~~LA~~~~~~VlLvDlDl~~g~~~~~l~~~~~~~l~d~l~~~~rlD~~~l~~~  236 (427)
T Consensus        15 ~~h~g~vlWlTG-LSGsGKsTiA~Al~~~L~~-~G~~~~~LDGDnvR~gL~~dLG----FS~~DR~eNIRRigEVa--~L   86 (187)
T TIGR00455        15 NKHRGVVLWLTG-LSGSGKSTIANALEKKLEK-KGYRVYVLDGDNVRHGLNKDLG----FSEEDRKENIRRIGEVA--KL   86 (187)
T ss_pred             CCCCEEEEEEEC-CCCCHHHHHHHHHHHHHHH-CCCEEEEECCCEEECCCCCCCC----CCHHHHCCCCCEEHHHH--HH
T ss_conf             279738985116-8856357999999999996-6974999758634247788888----88567056883532646--77


Q ss_pred             HHCCCCCEEEEECCCCCCCHHCCCHHHHHHHHHHHHHCCCEEEECCC
Q ss_conf             20248980687248761203207999999989998512888997388
Q gi|254780725|r  237 PVFYAENLSILTAPAMLSRTYDFDEKMIVPVLDILEQIFPLVILDVP  283 (427)
Q Consensus       237 l~~~~~gL~lL~a~~~~~~~~~~~~~~l~~ll~~l~~~yd~VIiD~p  283 (427)
T Consensus        87 ~~--~~G~i~ltsfISPyR---~~R~~vR~~~~~~Gl~F~Evfv~~P  128 (187)
T TIGR00455        87 LV--RNGVIVLTSFISPYR---ADRQMVRELIEEGGLEFIEVFVKCP  128 (187)
T ss_pred             HH--HCCEEEEEEEECCCH---HHHHHHHHHHHCCCEEEEEEECCCC
T ss_conf             76--479389984217766---6789998875405736899721788