HHsearch alignment for GI: 254780725 and conserved domain: TIGR00750
>TIGR00750 lao LAO/AO transport system ATPase; InterPro: IPR005129 Bacterial periplasmic transport systems require the function of a specific substrate-binding protein, located in the periplasm, and several cytoplasmic membrane transport components. In Escherichia coli K-12, the arginine-ornithine transport system requires an arginine-ornithine-binding protein and the lysine-arginine-ornithine (LAO) transport system includes a LAO-binding protein. Both periplasmic proteins can be phosphorylated by a single kinase, ArgK resulting in reduced levels of transport activity of the periplasmic transport systems that include each of the binding proteins. The ArgK protein acts as an ATPase enzyme and as a kinase..
Probab=97.70 E-value=0.0041 Score=38.33 Aligned_cols=158 Identities=15% Similarity=0.201 Sum_probs=95.6
Q ss_pred CCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCC-CCHHHCCCCCCCCHHHHHCCCCCHHHHHHHHHHH
Q ss_conf 753799974698877568999999999962699499997879898-6033438998789888631845612433765320
Q gi|254780725|r 160 SGCSISFIGSRGGVGSSTIAHNCAFSIASVFAMETLLADLDLPYG-TANINFDKDPINSISDAIYPVGRIDKAFVSRLPV 238 (427)
Q Consensus 160 ~grvIav~g~KGGvGkTTiA~nLA~~LA~~~~~~VlLvDlDl~~g-~~~~~l~~~~~~~l~d~l~~~~rlD~~~l~~~l~ 238 (427)
T Consensus 37 nA~~vG~TG-~PGaGKSTl~~~l~~~lrR-rG~~VaViAvDP~SPfTGGsiLG------------Dr~Rm~~~asrkql- 101 (333)
T TIGR00750 37 NAHVVGITG-VPGAGKSTLVEKLIMELRR-RGLKVAVIAVDPSSPFTGGSILG------------DRLRMQRLASRKQL- 101 (333)
T ss_pred CCEEEEEEC-CCCCCHHHHHHHHHHHHHH-CCCEEEEEEECCCCCCCCHHHHH------------HHHHHHHHHHHHHH-
T ss_conf 907876646-8888577799999899976-59768999887975975514545------------68877544222233-
Q ss_pred CCCCCEEEEECCCCCCCHHCCCH--HHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
Q ss_conf 24898068724876120320799--9999989998512888997388888989999986201254357877688999999
Q gi|254780725|r 239 FYAENLSILTAPAMLSRTYDFDE--KMIVPVLDILEQIFPLVILDVPHVWNSWTQEVLTLSDKVVITTSLDLAGLRNSKN 316 (427)
Q Consensus 239 ~~~~gL~lL~a~~~~~~~~~~~~--~~l~~ll~~l~~~yd~VIiD~p~~~~~~~~~~L~~AD~vviV~~p~~~slr~a~~ 316 (427)
T Consensus 102 W~dPg~FIRs~ptrG~-lGGls~at~~~~~lldA--~G~DVI~vETV-GVGQSEVdi~~~aDT~v~v~~pg~GDd----- 172 (333)
T TIGR00750 102 WTDPGVFIRSMPTRGS-LGGLSKATRELVKLLDA--AGYDVILVETV-GVGQSEVDIINMADTFVVVTIPGTGDD----- 172 (333)
T ss_pred HCCCCCEECCCCCCCC-HHHHHHHHHHHHHHHHH--CCCCEEEEEEE-CCCHHHHHHHHHHCEEEEEECCCCCCH-----
T ss_conf 2289856767766675-25787999999999986--38987999841-575248788734150589854887834-----
Q ss_pred HHHHHHH--CCCCCCCCEEEEECCCCCCCCH
Q ss_conf 9999998--1987675389995658987520
Q gi|254780725|r 317 LIDVLKK--LRPADKPPYLVLNQVKTPKKPE 345 (427)
Q Consensus 317 ll~~l~~--~~~~~~~~~iVlNr~~~~~~~~ 345 (427)
T Consensus 173 -~Q~iKaG~mEiaD---I~VVNKaD~~~a~~ 199 (333)
T TIGR00750 173 -VQGIKAGVMEIAD---IYVVNKADGEGAEE 199 (333)
T ss_pred -HHHHHHHHHEEEE---EEEEECCCCCCHHH
T ss_conf -6666544302324---87881688766589