HHsearch alignment for GI: 254780725 and conserved domain: TIGR02632
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase; InterPro: IPR013454 Rhamnose is a methyl-pentose sugar which is found as a constituent of pectin within the cell walls of dicotyledonous plants and has also been found in the mucilage of a number of legume plants . RhaD from Rhizobium leguminosarum bv. trifolii is encoded by a gene occurring in a rhamnose utilisation cluster, and is necessary for growth on this compound . This protein is predicted to be a bifunctional NAD-dependent aldolase/dehydrogenase..
Probab=93.72 E-value=0.061 Score=31.09 Aligned_cols=248 Identities=18% Similarity=0.210 Sum_probs=123.8
Q ss_pred CEEEEEEECCHHHHHHHHHHHHHHHHHHCEEEEECCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHH-HHHHH-----
Q ss_conf 305999838989999999886411002022373069989999998618998499998059876778899-98885-----
Q gi|254780725|r 28 RISVHVFCVTDTLYSVVERSKIDPRMSQVNMRITRGSIAEAVSCFSDSSTPDLIIVQTKVDSREVLSAL-EPLAE----- 101 (427)
Q Consensus 28 ~~~~~~f~~~~~~~~~~~~~~~drr~~~~~~~v~~g~~~~A~~~~~~~~~P~~iivd~~~~~~~~~~~l-~~la~----- 101 (427)
T Consensus 257 r~~i~~f~D~d~vL~Fvns~-e~~~La~LGts-----CPD---HflrTK-~~PL~iD~~P~-a~d~e~~~~~l~~~~~~Y 325 (709)
T TIGR02632 257 RRKIGTFDDSDAVLEFVNSK-EAPRLAALGTS-----CPD---HFLRTK-IRPLVIDWAPD-APDLEELVAKLKEGLEAY 325 (709)
T ss_pred CCEEEEECCCHHHHHHHHHH-CCCCHHHCCCC-----CCC---CHHHCC-CCCEEEECCCC-CCCHHHHHHHHHHHHHHH
T ss_conf 20035323747888876202-13105650676-----653---012315-35525732688-765899999999999987
Q ss_pred ---------H---------CCCCCEEEEE--------EC-----CCCHHHHHHHHH-----CCCCEEECCCCCHH-----
Q ss_conf ---------3---------2899808998--------16-----871899999997-----65626431899989-----
Q gi|254780725|r 102 ---------V---------CDSGTKVIVI--------GD-----TNDVSLYRALIS-----NHVSEYLIEPLSVA----- 140 (427)
Q Consensus 102 ---------~---------~~p~~~Vivi--------g~-----~~d~~l~r~l~r-----~Gv~dyl~~P~~~~----- 140 (427)
T Consensus 326 r~dY~~YYe~~~~p~Sp~Mr~a~P~v~LvPGvGm~SfGkdk~~arva~efY~~AI~VMRGA~Av~~Y~~L~e~E~F~IEY 405 (709)
T TIGR02632 326 REDYARYYERHRRPDSPTMRDANPAVLLVPGVGMISFGKDKETARVAAEFYVNAINVMRGAEAVSEYAALPEQEAFDIEY 405 (709)
T ss_pred HHHHHHHHHHCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCH
T ss_conf 89999997503788648888868738970771345346666667888999999997415611121025875110334101
Q ss_pred HHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHCCCCCCCCHHH
Q ss_conf 99997631023322234567537999746988775689999999999626994999978798986033438998789888
Q gi|254780725|r 141 DIINSISAIFTPQEEGKGSSGCSISFIGSRGGVGSSTIAHNCAFSIASVFAMETLLADLDLPYGTANINFDKDPINSISD 220 (427)
Q Consensus 141 ~l~~ai~~~~~~~~~~~~~~grvIav~g~KGGvGkTTiA~nLA~~LA~~~~~~VlLvDlDl~~g~~~~~l~~~~~~~l~d 220 (427)
T Consensus 406 W~LE-eaKL~rmP~-ek~LA~~Va~VtGGasGIG~~-----~A~rL~~e-GAhvV~aD~d~~~a~~-------------- 463 (709)
T TIGR02632 406 WALE-EAKLRRMPK-EKELARRVAFVTGGASGIGRE-----TARRLVDE-GAHVVLADLDAEAAEA-------------- 463 (709)
T ss_pred HHHH-HHHHHCCCC-CCCCCCEEEEEECCCCCHHHH-----HHHHHHHC-CCEEEEECCCHHHHHH--------------
T ss_conf 1679-998724765-967157068897388652689-----99999736-9779996236578999--------------
Q ss_pred HHCCCCCHHHHHHHHHHHCCCCCEE-----EEEC-CCCCCCHHCCCHHHHHHHHHHHHHCC---CEEEECCCCCCCHHHH
Q ss_conf 6318456124337653202489806-----8724-87612032079999999899985128---8899738888898999
Q gi|254780725|r 221 AIYPVGRIDKAFVSRLPVFYAENLS-----ILTA-PAMLSRTYDFDEKMIVPVLDILEQIF---PLVILDVPHVWNSWTQ 291 (427)
Q Consensus 221 ~l~~~~rlD~~~l~~~l~~~~~gL~-----lL~a-~~~~~~~~~~~~~~l~~ll~~l~~~y---d~VIiD~p~~~~~~~~ 291 (427)
T Consensus 464 -----------va~~~~~~fG~d~a~AGsdisaCGPaiGl~~DvT~e~~v~~~f~~v~~~yGGvD~vv~nAGi~~S~p~~ 532 (709)
T TIGR02632 464 -----------VAAEIVDKFGADKAVAGSDISACGPAIGLKLDVTDEEAVKAAFAEVALAYGGVDIVVNNAGIAVSSPLE 532 (709)
T ss_pred -----------HHHHHHHHCCCCCEECCCCHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHCCEEEEEECCCHHCCCCCH
T ss_conf -----------999986313888121143200046710027631758999999999999749847876525301057702
Q ss_pred H---HHHHCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 9---986201254357877688999999999
Q gi|254780725|r 292 E---VLTLSDKVVITTSLDLAGLRNSKNLID 319 (427)
Q Consensus 292 ~---~L~~AD~vviV~~p~~~slr~a~~ll~ 319 (427)
T Consensus 533 ~t~r~~~W~l~~di~atG~FLVareA~r~~~ 563 (709)
T TIGR02632 533 ETERLEEWDLNLDILATGYFLVAREAARLMR 563 (709)
T ss_pred HHHHHHHHHHCCEEEEECCHHHHHHHHHHHH
T ss_conf 3221554320120101200358889999997