HHsearch alignment for GI: 254780725 and conserved domain: cd01890
>cd01890 LepA LepA subfamily. LepA belongs to the GTPase family of and exhibits significant homology to the translation factors EF-G and EF-Tu, indicating its possible involvement in translation and association with the ribosome. LepA is ubiquitous in bacteria and eukaryota (e.g. yeast GUF1p), but is missing from archaea. This pattern of phyletic distribution suggests that LepA evolved through a duplication of the EF-G gene in bacteria, followed by early transfer into the eukaryotic lineage, most likely from the promitochondrial endosymbiont. Yeast GUF1p is not essential and mutant cells did not reveal any marked phenotype.
Probab=96.41 E-value=0.014 Score=35.12 Aligned_cols=84 Identities=15% Similarity=0.161 Sum_probs=59.9
Q ss_pred CCCEEEECCCCCCCH--HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCC-CCHHHHHH
Q ss_conf 288899738888898--999998620125435787768899999999999981987675389995658987-52005999
Q gi|254780725|r 274 IFPLVILDVPHVWNS--WTQEVLTLSDKVVITTSLDLAGLRNSKNLIDVLKKLRPADKPPYLVLNQVKTPK-KPEISISD 350 (427)
Q Consensus 274 ~yd~VIiD~p~~~~~--~~~~~L~~AD~vviV~~p~~~slr~a~~ll~~l~~~~~~~~~~~iVlNr~~~~~-~~~i~~~~ 350 (427)
T Consensus 66 ~~~in~iDtPGh~dF~~~~~~al~~~D~allVVda~~Gv~~qT~~~~~~a~~~~~---p~ivviNKiD~~~ad~~~v~~~ 142 (179)
T cd01890 66 EYLLNLIDTPGHVDFSYEVSRSLAACEGALLLVDATQGVEAQTLANFYLALENNL---EIIPVINKIDLPSADPERVKQQ 142 (179)
T ss_pred CEEEEEEECCCCCCCHHHHHHHHHHHCEEEEEEECCCCCCHHHHHHHHHHHHCCC---CEEEEEECCCCCCCCHHHHHHH
T ss_conf 1489999899864517789889975442789986477873748999999987699---8899986555677899999999
Q ss_pred HHHHHCCCEE
Q ss_conf 9998489537
Q gi|254780725|r 351 FCAPLGITPS 360 (427)
Q Consensus 351 ~~~~lg~~~~ 360 (427)
T Consensus 143 i~~~~g~~~~ 152 (179)
T cd01890 143 IEDVLGLDPS 152 (179)
T ss_pred HHHHHCCCCC
T ss_conf 9998688976