HHsearch alignment for GI: 254780725 and conserved domain: cd02036
>cd02036 MinD Bacterial cell division requires the formation of a septum at mid-cell. The site is determined by the min operon products MinC, MinD and MinE. MinC is a nonspecific inhibitor of the septum protein FtsZ. MinE is the supressor of MinC. MinD plays a pivotal role, selecting the mid-cell over other sites through the activation and regulation of MinC and MinE. MinD is a membrane-associated ATPase, related to nitrogenase iron protein. More distantly related proteins include flagellar biosynthesis proteins and ParA chromosome partitioning proteins. MinD is a monomer.
Probab=100.00 E-value=8.5e-36 Score=239.27 Aligned_cols=176 Identities=22% Similarity=0.325 Sum_probs=151.3
Q ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHCCCCCC--CCHHHHHCCCCCHHHHHHHHHHHCC
Q ss_conf 79997469887756899999999996269949999787989860334389987--8988863184561243376532024
Q gi|254780725|r 163 SISFIGSRGGVGSSTIAHNCAFSIASVFAMETLLADLDLPYGTANINFDKDPI--NSISDAIYPVGRIDKAFVSRLPVFY 240 (427)
Q Consensus 163 vIav~g~KGGvGkTTiA~nLA~~LA~~~~~~VlLvDlDl~~g~~~~~l~~~~~--~~l~d~l~~~~rlD~~~l~~~l~~~ 240 (427)
T Consensus 1 iIav~s~KGGVGKTT~a~NLA~aLa~-~g~~vllvD~D~~~~~l~~~~~~~~~~~~~~~~-------------------- 59 (179)
T cd02036 1 VIVVTSGKGGVGKTTTTANLGTALAQ-LGYKVVLIDADLGLRNLDLILGLENRVVYTLHD-------------------- 59 (179)
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHHH-CCCCEEEEECCCCCCCCHHHCCCCCCCCCHHHC--------------------
T ss_conf 98997399987099999999999997-799189995899999836661765566531311--------------------
Q ss_pred CCCEEEEECCCCCCCHHCCCHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 89806872487612032079999999899985128889973888889899999862012543578776889999999999
Q gi|254780725|r 241 AENLSILTAPAMLSRTYDFDEKMIVPVLDILEQIFPLVILDVPHVWNSWTQEVLTLSDKVVITTSLDLAGLRNSKNLIDV 320 (427)
Q Consensus 241 ~~gL~lL~a~~~~~~~~~~~~~~l~~ll~~l~~~yd~VIiD~p~~~~~~~~~~L~~AD~vviV~~p~~~slr~a~~ll~~ 320 (427)
T Consensus 60 -----vl~g--------------------------D~viiD~ppg~~~~~~~~l~~ad~vlvv~~p~~~sl~~~~~~~~~ 108 (179)
T cd02036 60 -----VLAG--------------------------DYILIDSPAGIERGFITAIAPADEALLVTTPEISSLRDADRVKGL 108 (179)
T ss_pred -----CCCC--------------------------CEEEEECCCCCCHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHH
T ss_conf -----2669--------------------------999997999988899999984681256378858899999999999
Q ss_pred HHHCCCCCCCCEEEEECCCCCC-CCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHCCCCEEEECCCCHHHHHH
Q ss_conf 9981987675389995658987-520059999998489537990687999999884796189888999899999
Q gi|254780725|r 321 LKKLRPADKPPYLVLNQVKTPK-KPEISISDFCAPLGITPSAIIPFDGAVFGMSANSGKMIHEVDPKSAIANLL 393 (427)
Q Consensus 321 l~~~~~~~~~~~iVlNr~~~~~-~~~i~~~~~~~~lg~~~~~~IP~D~~~~~~A~~~G~pi~e~~p~s~~a~~~ 393 (427)
T Consensus 109 ~~~~~~--~~~~vv~Nr~~~~~~~~~~~~~~~~~~l~~~vlg~IP~d~~-v~eA~~~g~Pv~~~~P~s~aA~ay 179 (179)
T cd02036 109 LEALGI--KVVGVIVNRVRPDMVEGGDMVEDIEEILGVPLLGVIPEDPA-VIRATNRGEPVVLNKPKSPAAQAY 179 (179)
T ss_pred HHHCCC--CEEEEEECCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCHH-HHHHHHCCCEEEEECCCCHHHHCC
T ss_conf 982599--64699984546766636779999998559967988779889-999876795389879999566309