HHsearch alignment for GI: 254780725 and conserved domain: cd03110
>cd03110 Fer4_NifH_child This protein family's function is unkown. It contains nucleotide binding site. It uses NTP as energy source to transfer electron or ion.
Probab=99.96 E-value=9.6e-28 Score=189.76 Aligned_cols=177 Identities=19% Similarity=0.227 Sum_probs=129.7
Q ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHCCCCCCCCHHHHHCC-CCCHHHHHHHHHHHCCC
Q ss_conf 79997469887756899999999996269949999787989860334389987898886318-45612433765320248
Q gi|254780725|r 163 SISFIGSRGGVGSSTIAHNCAFSIASVFAMETLLADLDLPYGTANINFDKDPINSISDAIYP-VGRIDKAFVSRLPVFYA 241 (427)
Q Consensus 163 vIav~g~KGGvGkTTiA~nLA~~LA~~~~~~VlLvDlDl~~g~~~~~l~~~~~~~l~d~l~~-~~rlD~~~l~~~l~~~~ 241 (427)
T Consensus 1 kIaV~SgKGGVGKTT~a~nLA~~l-----~~V~liD~D~~~~n~~~~l~~~~~~~~~~~~~~~~~~~~~~~~------~~ 69 (179)
T cd03110 1 QIAVISGKGGTGKTTVTAALAALL-----KNVVLADCDVDAPNLHLFLKPEIEEEEDFIVGGKKAVIDPELC------IS 69 (179)
T ss_pred CEEEEECCCCCHHHHHHHHHHHHC-----CCCEEEEECCCCCCHHHHCCCCCCCCEEEEECCCCCEECHHHH------HH
T ss_conf 989995899860999999999974-----2871999418998577771876563212230465335150665------32
Q ss_pred CCEEEEECCCCCCCHHCCCHHHHHHH-HHHHHHCCCEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 98068724876120320799999998-99985128889973888889899999862012543578776889999999999
Q gi|254780725|r 242 ENLSILTAPAMLSRTYDFDEKMIVPV-LDILEQIFPLVILDVPHVWNSWTQEVLTLSDKVVITTSLDLAGLRNSKNLIDV 320 (427)
Q Consensus 242 ~gL~lL~a~~~~~~~~~~~~~~l~~l-l~~l~~~yd~VIiD~p~~~~~~~~~~L~~AD~vviV~~p~~~slr~a~~ll~~ 320 (427)
T Consensus 70 ~g~~-----------~~~~~~~~~~~~~~~~~~~~D~viiD~Ppg~~~~~~~al~~ad~~iiVttP~~~si~d~~r~i~l 138 (179)
T cd03110 70 CGLC-----------GKLVTEVRKHAKEIAKAEGAELIIIDGPPGIGCPVIASLTGADAALLVTEPTPSGLHDLERAVEL 138 (179)
T ss_pred CCCH-----------HHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHH
T ss_conf 3517-----------68899999999998644379989981899975789999973994999819947899999999999
Q ss_pred HHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCEEEEEC
Q ss_conf 99819876753899956589875200599999984895379906
Q gi|254780725|r 321 LKKLRPADKPPYLVLNQVKTPKKPEISISDFCAPLGITPSAIIP 364 (427)
Q Consensus 321 l~~~~~~~~~~~iVlNr~~~~~~~~i~~~~~~~~lg~~~~~~IP 364 (427)
T Consensus 139 ~~~~~~---~~gvV~Nr~~~~~~~~~~i~~~~~~~~vp~LG~iP 179 (179)
T cd03110 139 VRHFGI---PVGVVINKYDLNDEIAEEIEDYCEEEGIPILGKIP 179 (179)
T ss_pred HHHCCC---CEEEEEECCCCCCCCHHHHHHHHHHHCCCEEEECC
T ss_conf 998299---78999968878876348999999980999898387