HHsearch alignment for GI: 254780725 and conserved domain: pfam01656

>pfam01656 CbiA CobQ/CobB/MinD/ParA nucleotide binding domain. This family consists of various cobyrinic acid a,c-diamide synthases. These include CbiA and CbiP from S.typhimurium, and CobQ from R. capsulatus. These amidases catalyse amidations to various side chains of hydrogenobyrinic acid or cobyrinic acid a,c-diamide in the biosynthesis of cobalamin (vitamin B12) from uroporphyrinogen III. Vitamin B12 is an important cofactor and an essential nutrient for many plants and animals and is primarily produced by bacteria. The family also contains dethiobiotin synthetases as well as the plasmid partitioning proteins of the MinD/ParA family.
Probab=99.98  E-value=5.5e-31  Score=209.66  Aligned_cols=202  Identities=19%  Similarity=0.209  Sum_probs=148.3

Q ss_pred             EEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHCCCCCCCCHHHHHCCCCCH-HHHHHHHHH--HCC
Q ss_conf             99974698877568999999999962699499997879898603343899878988863184561-243376532--024
Q gi|254780725|r  164 ISFIGSRGGVGSSTIAHNCAFSIASVFAMETLLADLDLPYGTANINFDKDPINSISDAIYPVGRI-DKAFVSRLP--VFY  240 (427)
Q Consensus       164 Iav~g~KGGvGkTTiA~nLA~~LA~~~~~~VlLvDlDl~~g~~~~~l~~~~~~~l~d~l~~~~rl-D~~~l~~~l--~~~  240 (427)
T Consensus         1 Iav~s~KGGVGKTT~a~nLA~~la~-~G~rVlliD~D~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (212)
T pfam01656         1 IAIAGTKGGVGKTTLAANLARALAK-RGYRVLLIDLDPQANLTSSLGKGPDLIDVLKEGLEIVDAQPLQHIAAAIVPSRN   79 (212)
T ss_pred             CEEECCCCCHHHHHHHHHHHHHHHH-CCCCEEEEECCCCCCCHHHHCCCCCCCCCCCCCCHHCCCCCHHHHHHEEECCCC
T ss_conf             9897689980699999999999997-899789983899996258865876434444441010112100245642224555


Q ss_pred             CCCEEEEECCCCCCCHHCCCHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf             89806872487612032079999999899985128889973888889899999862012543578776889999999999
Q gi|254780725|r  241 AENLSILTAPAMLSRTYDFDEKMIVPVLDILEQIFPLVILDVPHVWNSWTQEVLTLSDKVVITTSLDLAGLRNSKNLIDV  320 (427)
Q Consensus       241 ~~gL~lL~a~~~~~~~~~~~~~~l~~ll~~l~~~yd~VIiD~p~~~~~~~~~~L~~AD~vviV~~p~~~slr~a~~ll~~  320 (427)
T Consensus        80 ~~~l~l~p~~~~~~~~~-~~~~~~~~~~~~~~~~~D~viiD~pp~~~~~~~~al~~ad~vivv~~p~~~sl~~~~~l~~~  158 (212)
T pfam01656        80 LDPLLLIPSNLSLANFE-SELILEGGEEGLIKLAYDYVIIDGAPGLGELTANALVAADILVVPIEPEGVAVLGAQRLLEL  158 (212)
T ss_pred             CCCEEEECCCHHHHHHH-HHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHH
T ss_conf             58746533501566777-77799999987666049989994799755999999983998999948976999999999999


Q ss_pred             HHHCCCCCCCCEEEEECCCCCCCCHH--HHHHHHHHHCCCE---EEEECCCHHH
Q ss_conf             99819876753899956589875200--5999999848953---7990687999
Q gi|254780725|r  321 LKKLRPADKPPYLVLNQVKTPKKPEI--SISDFCAPLGITP---SAIIPFDGAV  369 (427)
Q Consensus       321 l~~~~~~~~~~~iVlNr~~~~~~~~i--~~~~~~~~lg~~~---~~~IP~D~~~  369 (427)
T Consensus       159 ~~~l~~--~~~gvV~N~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ip~d~~v  210 (212)
T pfam01656       159 VERLGL--KILGVVLNKVDRGDERHLDKEIEALERKTGIPVLLLLGVIPRDLAL  210 (212)
T ss_pred             HHHCCC--CCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCC
T ss_conf             998599--6229999148899836630789999999789975140411687766