HHsearch alignment for GI: 254780725 and conserved domain: pfam03308
>pfam03308 ArgK ArgK protein. The ArgK protein acts as an ATPase enzyme and as a kinase, and phosphorylates periplasmic binding proteins involved in the LAO (lysine, arginine, ornithine)/AO transport systems.
Probab=98.31 E-value=1.1e-05 Score=54.21 Aligned_cols=165 Identities=15% Similarity=0.197 Sum_probs=99.4
Q ss_pred CCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCC-CCHHHCCCCCCCCHHHHHCCCCCHHHHHHHHHHH
Q ss_conf 753799974698877568999999999962699499997879898-6033438998789888631845612433765320
Q gi|254780725|r 160 SGCSISFIGSRGGVGSSTIAHNCAFSIASVFAMETLLADLDLPYG-TANINFDKDPINSISDAIYPVGRIDKAFVSRLPV 238 (427)
Q Consensus 160 ~grvIav~g~KGGvGkTTiA~nLA~~LA~~~~~~VlLvDlDl~~g-~~~~~l~~~~~~~l~d~l~~~~rlD~~~l~~~l~ 238 (427)
T Consensus 28 ~a~~iGiTG-~PGaGKStli~~l~~~~~~-~g~~vaVlAvDPSS~~sgGaiLG------------Dr~RM~~~------- 86 (267)
T pfam03308 28 RAHRVGITG-VPGAGKSTLIEALGMELRR-RGHRVAVLAVDPSSPFTGGSILG------------DRTRMQRL------- 86 (267)
T ss_pred CCEEEEEEC-CCCCCHHHHHHHHHHHHHH-CCCEEEEEEECCCCCCCCCCCCC------------CHHHHHHH-------
T ss_conf 955998768-9988799999999999996-89868999978999888863001------------07777650-------
Q ss_pred CCCCCEEEEECCCCCCCHHCCCHHHHHHHHHHHHH-CCCEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCHHH-HHHHHH
Q ss_conf 24898068724876120320799999998999851-2888997388888989999986201254357877688-999999
Q gi|254780725|r 239 FYAENLSILTAPAMLSRTYDFDEKMIVPVLDILEQ-IFPLVILDVPHVWNSWTQEVLTLSDKVVITTSLDLAG-LRNSKN 316 (427)
Q Consensus 239 ~~~~gL~lL~a~~~~~~~~~~~~~~l~~ll~~l~~-~yd~VIiD~p~~~~~~~~~~L~~AD~vviV~~p~~~s-lr~a~~ 316 (427)
T Consensus 87 ~~~~~vfiRs~~sr-g~lGGls~~-t~~~i~lleaaGfD~IivETV-GVGQsE~~v~~~aD~~llv~~Pg~GDeiQ~iKa 163 (267)
T pfam03308 87 AVDPGAFIRSSPSR-GALGGLSRA-TREAILLLDAAGFDVIIIETV-GVGQSEVDIANMADTFVLVTIPGGGDDLQGIKA 163 (267)
T ss_pred CCCCCEEEEECCCC-CCCCCCCHH-HHHHHHHHHHCCCCEEEEECC-CCCCCCHHHHHHCCEEEEEECCCCCHHHHHHHH
T ss_conf 58998588645778-888871476-999999999779999999247-777530355541576899955887608889875
Q ss_pred HHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCC
Q ss_conf 99999981987675389995658987520059999998489
Q gi|254780725|r 317 LIDVLKKLRPADKPPYLVLNQVKTPKKPEISISDFCAPLGI 357 (427)
Q Consensus 317 ll~~l~~~~~~~~~~~iVlNr~~~~~~~~i~~~~~~~~lg~ 357 (427)
T Consensus 164 GI-----mEiaD---i~vVNKaD~~~-A~~~~~~l~~~l~l 195 (267)
T pfam03308 164 GL-----MEIAD---IYVVNKADLPG-AERTARELRSALHL 195 (267)
T ss_pred HH-----HHHCC---EEEEECCCHHH-HHHHHHHHHHHHHC
T ss_conf 37-----65354---89996676476-99999999999851