HHsearch alignment for GI: 254780725 and conserved domain: pfam03796
>pfam03796 DnaB_C DnaB-like helicase C terminal domain. The hexameric helicase DnaB unwinds the DNA duplex at the Escherichia coli chromosome replication fork. Although the mechanism by which DnaB both couples ATP hydrolysis to translocation along DNA and denatures the duplex is unknown, a change in the quaternary structure of the protein involving dimerization of the N-terminal domain has been observed and may occur during the enzymatic cycle. This C-terminal domain contains an ATP-binding site and is therefore probably the site of ATP hydrolysis.
Probab=97.36 E-value=0.0072 Score=36.81 Aligned_cols=47 Identities=21% Similarity=0.232 Sum_probs=37.0
Q ss_pred CCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCC
Q ss_conf 675379997469887756899999999996269949999787989860
Q gi|254780725|r 159 SSGCSISFIGSRGGVGSSTIAHNCAFSIASVFAMETLLADLDLPYGTA 206 (427)
Q Consensus 159 ~~grvIav~g~KGGvGkTTiA~nLA~~LA~~~~~~VlLvDlDl~~g~~ 206 (427)
T Consensus 17 ~~G~-l~vi~g~pg~GKS~~~~~~a~~~a~~~g~~Vl~~slEm~~~~~ 63 (186)
T pfam03796 17 QKGD-LIIIAARPSMGKTAFALNIARNAALKQDKPVLFFSLEMSAEQL 63 (186)
T ss_pred CCCC-EEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHH
T ss_conf 8881-7999967999879999999999999709966875475529999