HHsearch alignment for GI: 254780725 and conserved domain: pfam05729
>pfam05729 NACHT NACHT domain. This NTPase domain is found in apoptosis proteins as well as those involved in MHC transcription activation. This family is closely related to pfam00931.
Probab=91.93 E-value=0.2 Score=27.97 Aligned_cols=27 Identities=22% Similarity=0.327 Sum_probs=22.8
Q ss_pred EEEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf 3799974698877568999999999962
Q gi|254780725|r 162 CSISFIGSRGGVGSSTIAHNCAFSIASV 189 (427)
Q Consensus 162 rvIav~g~KGGvGkTTiA~nLA~~LA~~ 189 (427)
T Consensus 1 r~i~i~G-~aG~GKTtll~kl~~~wa~g 27 (165)
T pfam05729 1 RTVILQG-EAGSGKTTLLQKLALLWAQG 27 (165)
T ss_pred CEEEEEC-CCCCCHHHHHHHHHHHHHCC
T ss_conf 9899982-79898999999999999869