HHsearch alignment for GI: 254780725 and conserved domain: pfam07755
>pfam07755 DUF1611 Protein of unknown function (DUF1611). This region is found in a number of hypothetical bacterial and archaeal proteins. The region is approximately 350 residues long. A member of this family is thought to associate with another subunit to form an H+-transporting ATPase, but no evidence has been found to support this.
Probab=94.89 E-value=0.28 Score=27.01 Aligned_cols=247 Identities=17% Similarity=0.181 Sum_probs=140.9
Q ss_pred CCHHHHHHHHHCCCCCCEEEEECCCCCCCH-HHHHHHHHHHCCCCCEEEEEEC---CCCHHHHHHHHHCCCCEE-ECCCC
Q ss_conf 998999999861899849999805987677-8899988853289980899816---871899999997656264-31899
Q gi|254780725|r 63 GSIAEAVSCFSDSSTPDLIIVQTKVDSREV-LSALEPLAEVCDSGTKVIVIGD---TNDVSLYRALISNHVSEY-LIEPL 137 (427)
Q Consensus 63 g~~~~A~~~~~~~~~P~~iivd~~~~~~~~-~~~l~~la~~~~p~~~Vivig~---~~d~~l~r~l~r~Gv~dy-l~~P~ 137 (427)
T Consensus 24 ~sl~eA~~-----~g~~~liiGiA~~GG~lp~~w~~~i~~Ai~~GldIvsGLH~~L~ddp~l~~~A~~~g~~i~DvR~p~ 98 (302)
T pfam07755 24 SSLEEALA-----AGADTLIIGIAPSGGVLPEAWREVLLEALEAGLDVVSGLHEFLSDDPELAAAAKKHGVQIIDVRKPP 98 (302)
T ss_pred CCHHHHHH-----CCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEHHHHHHHHCCHHHHHHHHHCCCEEEEECCCC
T ss_conf 76999986-----6999899974168884898999999999982892623357775148989999998699799915899
Q ss_pred CHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHCCCCCCCC
Q ss_conf 98999997631023322234567537999746988775689999999999626994999978798986033438998789
Q gi|254780725|r 138 SVADIINSISAIFTPQEEGKGSSGCSISFIGSRGGVGSSTIAHNCAFSIASVFAMETLLADLDLPYGTANINFDKDPINS 217 (427)
Q Consensus 138 ~~~~l~~ai~~~~~~~~~~~~~~grvIav~g~KGGvGkTTiA~nLA~~LA~~~~~~VlLvDlDl~~g~~~~~l~~~~~~~ 217 (427)
T Consensus 99 ~--~----~-~~~~g--~~~~~~~~rvl~vGTDcavGK~tTal~l~~~l~~-~Gi~a~fiaT----GQTGili~---g~G 161 (302)
T pfam07755 99 V--D----L-PVATG--KAREVKAKRVLTVGTDCAVGKMTTALELERALRE-RGLNAAFVAT----GQTGILIA---GYG 161 (302)
T ss_pred C--C----C-CCCCC--CCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHH-CCCCEEEEEC----CCCEEEEE---CCE
T ss_conf 9--8----8-65768--4014798789996057334078999999999997-7998479972----76136881---524
Q ss_pred HHHHHCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCHHCCCHHHHHHHHHHHHHCCCEEEECCCCCC-----CHHHHH
Q ss_conf 888631845612433765320248980687248761203207999999989998512888997388888-----989999
Q gi|254780725|r 218 ISDAIYPVGRIDKAFVSRLPVFYAENLSILTAPAMLSRTYDFDEKMIVPVLDILEQIFPLVILDVPHVW-----NSWTQE 292 (427)
Q Consensus 218 l~d~l~~~~rlD~~~l~~~l~~~~~gL~lL~a~~~~~~~~~~~~~~l~~ll~~l~~~yd~VIiD~p~~~-----~~~~~~ 292 (427)
T Consensus 162 v~--------iDav------------------------~~DFvaGavE~~v~~~~~~~d~iiIEGQgSL~hP~y~gvsl~ 209 (302)
T pfam07755 162 VP--------LDAV------------------------PADFVAGAVEALVLDAAEEDDWIVIEGQGSLSHPAYSGVTLG 209 (302)
T ss_pred EE--------ECCC------------------------HHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHH
T ss_conf 78--------4322------------------------476676789999986454678799916543236656654598
Q ss_pred HHHH--CCCCCCCCCCCH-----------HHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCC-CCHHHHHHHHHHHCCC
Q ss_conf 9862--012543578776-----------8899999999999981987675389995658987-5200599999984895
Q gi|254780725|r 293 VLTL--SDKVVITTSLDL-----------AGLRNSKNLIDVLKKLRPADKPPYLVLNQVKTPK-KPEISISDFCAPLGIT 358 (427)
Q Consensus 293 ~L~~--AD~vviV~~p~~-----------~slr~a~~ll~~l~~~~~~~~~~~iVlNr~~~~~-~~~i~~~~~~~~lg~~ 358 (427)
T Consensus 210 lL~Gs~Pd~lIL~H~p~R~~~~~~~~~~iP~l~~~i~l~e~~a~~~~~~kvvgIslNt~~l~~~ea~~~~~~~~~~~glP 289 (302)
T pfam07755 210 LLHGSQPDALVLCHRPGRKHRRGFPHYPLPPLEEEIELIEALAGTTPPAKVVGISLNTRGLSEAEAREAIERIEEELGLP 289 (302)
T ss_pred HHCCCCCCEEEEECCCCCCEECCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCC
T ss_conf 86078998699963789862278766889998999999999736479973999995578799999999999999998997
Q ss_pred EEEEE
Q ss_conf 37990
Q gi|254780725|r 359 PSAII 363 (427)
Q Consensus 359 ~~~~I 363 (427)
T Consensus 290 v~Dp~ 294 (302)
T pfam07755 290 VTDPV 294 (302)
T ss_pred EEECC
T ss_conf 47121