BLAST/PSIBLAST alignment of GI: 254780725 and GI: 116249983 at iteration 1
>gi|116249983|ref|YP_765821.1| pilus assembly protein [Rhizobium leguminosarum bv. viciae 3841] Length = 425
>gi|115254631|emb|CAK05705.1| putative pilus assembly protein [Rhizobium leguminosarum bv. viciae 3841] Length = 425
Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust.
Identities = 209/410 (50%), Positives = 290/410 (70%), Gaps = 9/410 (2%)
Query: 3 IGYDGHNSDFLENEDNLS-----ESMCSLPRISVHVFCVTDTLYSVVERSKIDPRMSQVN 57
I Y+ N L N + E+M LPRISVH FC ++ L V+ER D R+++V+
Sbjct: 4 IEYEIRNPSELRNAEEAVRMADLENMRPLPRISVHAFCESEALQHVMERCANDRRVAKVS 63
Query: 58 MRITRGSIAEAVSCFSDSSTPDLIIVQTKVDSREVLSALEPLAEVCDSGTKVIVIGDTND 117
MRIT G +A A + FS + TP+LII++TK ++ +L L PLA VCD TKV++IG ND
Sbjct: 64 MRITSGGVAAAANMFSGAPTPNLIILETKANAANLLGELAPLAAVCDPTTKVVIIGYYND 123
Query: 118 VSLYRALISNHVSEYLIEPLSVADIINSISAIFT-PQEEGKGSSGCSISFIGSRGGVGSS 176
+ LYR LI N +SEY+++P+++ DI+ ++++IF P E G S I+FIGS+GG G+S
Sbjct: 124 IGLYRELIRNGISEYMVQPVAMPDILTAMASIFVDPDAEPLGRS---IAFIGSKGGTGAS 180
Query: 177 TIAHNCAFSIASVFAMETLLADLDLPYGTANINFDKDPINSISDAIYPVGRIDKAFVSRL 236
TIAHNCAF I+++F+ ET+LADLDLPYGTANI+FD+DP I++A++ R+D+ F+ RL
Sbjct: 181 TIAHNCAFGISNLFSTETILADLDLPYGTANIDFDQDPAQGIAEAVFAPDRLDEVFLDRL 240
Query: 237 PVFYAENLSILTAPAMLSRTYDFDEKMIVPVLDILEQIFPLVILDVPHVWNSWTQEVLTL 296
+E+LS+L AP++L R YDFD + PVLD+L++ P+ +LDVPH W+ WT+ VL+
Sbjct: 241 LTKCSEHLSLLAAPSLLDRAYDFDGQAFQPVLDVLQRSAPVTVLDVPHAWSEWTRSVLSS 300
Query: 297 SDKVVITTSLDLAGLRNSKNLIDVLKKLRPADKPPYLVLNQVKTPKKPEISISDFCAPLG 356
D+VVI DLA LRN+KN++D L+K+RP D+PP+L+LNQV PK+PEIS SDFC PL
Sbjct: 301 VDEVVIAAVPDLANLRNAKNMLDALRKMRPNDRPPHLILNQVGMPKRPEISPSDFCEPLE 360
Query: 357 ITPSAIIPFDGAVFGMSANSGKMIHEVDPKSAIANLLVDFSRVLMGRVTV 406
I P AIIPFD +FG +ANSG+MI EVDPKS A S ++ GRV +
Sbjct: 361 IDPIAIIPFDINLFGNAANSGRMISEVDPKSPTAETFSQISHIVTGRVAI 410