RPSBLAST alignment for GI: 254780725 and conserved domain: COG4963

>gnl|CDD|34570 COG4963, CpaE, Flp pilus assembly protein, ATPase CpaE [Intracellular trafficking and secretion]. Length = 366
 Score =  228 bits (583), Expect = 2e-60
 Identities = 110/286 (38%), Positives = 166/286 (58%), Gaps = 7/286 (2%)

Query: 123 ALISNHVSEYLIEPLSVADIINSISAIFTPQEEGKGSSGCSISFIGSRGGVGSSTIAHNC 182
           A I N           V D ++  S   +  ++G+      ++F+G++GGVG+ST+AHN 
Sbjct: 71  ADIKNIKENLAAIRAGVNDCVDIESDSISIAQQGR-----ELAFLGAKGGVGTSTLAHNL 125

Query: 183 AFSIASVFAMETLLADLDLPYGTANINFDKDPINSISDAIYPVGRIDKAFVSRLPVFYAE 242
           A  +A +     LL DLDL  GTA +  D+DP   I++A+    R+D+  +  L    A 
Sbjct: 126 AKGLAILSGAAVLLVDLDLQGGTAALYLDQDPAFGIAEAVKQPERLDQVLLDSLLTRLAS 185

Query: 243 NLSILTAPAMLSRTYDFDEKMIVPVLDILEQIFPLVILDVPHVWNSWTQEVLTLSDKVVI 302
            L +L AP  L++ YD     +  +LD+L   F  V++D+P++W  WT++VL+ SD++VI
Sbjct: 186 GLKLLAAPTELAKNYDLKTGAVERLLDLLRGSFDFVVVDLPNIWTDWTRQVLSGSDEIVI 245

Query: 303 TTSLDLAGLRNSKNLIDVLKKLRPADKPPYLVLNQVKTPKKPEISISDFCAPLGITPSAI 362
                LA LRN+K L+D LK+LRP D  P LVLN+V  PK+PE   SD    LGI    +
Sbjct: 246 VAEPSLASLRNAKELLDELKRLRPNDPKPILVLNRVGVPKRPE--PSDLEEILGIESLLV 303

Query: 363 IPFDGAVFGMSANSGKMIHEVDPKSAIANLLVDFSRVLMGRVTVSK 408
           +PFD A+FG +AN+G+M+ EVDP S  A  L   ++ L GR++  +
Sbjct: 304 LPFDPALFGDAANNGRMLSEVDPGSPAAKALAQLAQSLGGRISGER 349