RPSBLAST alignment for GI: 254780725 and conserved domain: COG4963
>gnl|CDD|34570 COG4963, CpaE, Flp pilus assembly protein, ATPase CpaE [Intracellular trafficking and secretion]. Length = 366
Score = 228 bits (583), Expect = 2e-60
Identities = 110/286 (38%), Positives = 166/286 (58%), Gaps = 7/286 (2%)
Query: 123 ALISNHVSEYLIEPLSVADIINSISAIFTPQEEGKGSSGCSISFIGSRGGVGSSTIAHNC 182
A I N V D ++ S + ++G+ ++F+G++GGVG+ST+AHN
Sbjct: 71 ADIKNIKENLAAIRAGVNDCVDIESDSISIAQQGR-----ELAFLGAKGGVGTSTLAHNL 125
Query: 183 AFSIASVFAMETLLADLDLPYGTANINFDKDPINSISDAIYPVGRIDKAFVSRLPVFYAE 242
A +A + LL DLDL GTA + D+DP I++A+ R+D+ + L A
Sbjct: 126 AKGLAILSGAAVLLVDLDLQGGTAALYLDQDPAFGIAEAVKQPERLDQVLLDSLLTRLAS 185
Query: 243 NLSILTAPAMLSRTYDFDEKMIVPVLDILEQIFPLVILDVPHVWNSWTQEVLTLSDKVVI 302
L +L AP L++ YD + +LD+L F V++D+P++W WT++VL+ SD++VI
Sbjct: 186 GLKLLAAPTELAKNYDLKTGAVERLLDLLRGSFDFVVVDLPNIWTDWTRQVLSGSDEIVI 245
Query: 303 TTSLDLAGLRNSKNLIDVLKKLRPADKPPYLVLNQVKTPKKPEISISDFCAPLGITPSAI 362
LA LRN+K L+D LK+LRP D P LVLN+V PK+PE SD LGI +
Sbjct: 246 VAEPSLASLRNAKELLDELKRLRPNDPKPILVLNRVGVPKRPE--PSDLEEILGIESLLV 303
Query: 363 IPFDGAVFGMSANSGKMIHEVDPKSAIANLLVDFSRVLMGRVTVSK 408
+PFD A+FG +AN+G+M+ EVDP S A L ++ L GR++ +
Sbjct: 304 LPFDPALFGDAANNGRMLSEVDPGSPAAKALAQLAQSLGGRISGER 349