HHsearch alignment for GI: 254780727 and conserved domain: PRK10560

>PRK10560 hofQ outer membrane porin HofQ; Provisional.
Probab=100.00  E-value=0  Score=383.19  Aligned_cols=278  Identities=24%  Similarity=0.374  Sum_probs=223.0

Q ss_pred             CCCHHHHHHHHHHHCC-CCCEEEEEECCEEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCE
Q ss_conf             4541478999998578-771699983894999997199999999999999861223455555665443035543277722
Q gi|254780727|r  117 ERDIAHLEMTLRRFIA-DSNIRVEMVSDTVVLHGMVRTIQDSQRAVELSETFLSQSGRNQYANSSSKKVMNLLNIAGEDQ  195 (474)
Q Consensus       117 ~~d~~~l~~~l~~~~p-~~~i~v~~~~~~vvl~G~v~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~vvn~l~v~~~~Q  195 (474)
T Consensus       100 ya~~~~~~~~~~~~ls~~g~i~~d~~tN~liV~~t---~~~~~~i~~l---------------------i~~lD~~~-~Q  154 (386)
T PRK10560        100 YADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDN---KTALSALEQW---------------------VAQMDLPV-GQ  154 (386)
T ss_pred             ECCHHHHHHHHHHHCCCCCEEEEECCCCEEEEECC---HHHHHHHHHH---------------------HHHHCCCC-CE
T ss_conf             08999999765532267730999368887999749---9999999999---------------------99746767-77


Q ss_pred             EEEEEEEEEEECHHHHHCCCEEEECCCCCCCCCCCCCCCCC----CCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCEEE
Q ss_conf             79999999985001442261210014543364435455666----66666543033420377414311023773597589
Q gi|254780727|r  196 VTLKVTIAEVRRDILKQIGFQHSITGSSSGPSKSFAADFGG----KFVSEGGDFSVKGVLDRFSFETVLHALERATAIRT  271 (474)
Q Consensus       196 V~lev~i~EVs~~~~~~lGi~w~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~aL~~~g~a~i  271 (474)
T Consensus       155 V~Iea~IvEv~~~~~~~lGv~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~l~~~l~aL~~~g~~~i  233 (386)
T PRK10560        155 VELAAHIVTINEKSLRELGVKWTLADAQQAGGVGQVTTLGSDLSVATATTHVGFN-IGRINGRLLDLELSALEQKQQLDI  233 (386)
T ss_pred             EEEEEEEEEEECCCHHHHCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE-EECCCCHHHHHHHHHHHHCCCCEE
T ss_conf             9999999999778338607223413466788646544446654455644543146-521363558886799873898439


Q ss_pred             EECCEEEEECCCEEEEEECCCEEEEECCCCCCCEEEEEEEEEEEEEEEEEEECCCEEEEEEEEEECCCCC--CCCCCCCC
Q ss_conf             8422389875946757524730000013677620468988758999998981598499986123203445--55566532
Q gi|254780727|r  272 LAEPTLTAISGQSASFTSGGQHLYKTVSSSTGATSVTTHDYGVVLHFTPTVLSPGRIGLRIQTEVSEPVI--GVNAGDMP  349 (474)
Q Consensus       272 La~P~l~t~sgq~A~~~~G~e~pi~~~~~~~~~~~v~~~~~Gi~L~vtP~V~~~g~I~L~i~~evS~~~~--~~~~~~~P  349 (474)
T Consensus       234 lS~P~i~t~~n~~A~I~vG~~ip~~~~~~~~~~t~~~~~~~gl~L~VtP~I~~dg~I~l~i~i~~~~~~~~~~~~~~~~~  313 (386)
T PRK10560        234 IASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVL  313 (386)
T ss_pred             EECCEEEEECCCEEEEECCEEEEEEECCCCCCCEEEEEEEEEEEEEEEEEECCCCEEEEEEEEEECCCCCCCCCCCCCCC
T ss_conf             86787998379779998531998995147777325899997689999889988991999999974377620205787654


Q ss_pred             EEEEEEEEEEEEECCCCEEEEEEEEEEEECCCCCCCCCEECCCCEEECCCCCCCCCCEEEEEEEEECEECC
Q ss_conf             16789999999985899899997665310132125711201761200016564552115999999051503
Q gi|254780727|r  350 SYRVRKADTTVELPSGGTIVLAGLLKDDIQQLKEGIPLLSKIPILGALFRNSRFNREETEIFIAATPFLVK  420 (474)
Q Consensus       350 ~i~~R~~~T~V~l~~Get~vIgGL~~~~~~~~~~~vP~LgdIPilG~LF~s~~~~~~~tELvI~iTP~iV~  420 (474)
T Consensus       314 ~i~~r~~~T~v~v~dGetvviGGLi~~~~~~~~~~VP~LgdIP~lG~LF~~~~~~~~k~eLlIfItP~Iv~  384 (386)
T PRK10560        314 AIDKQEIETQVEVKSGETLALGGIFSRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVS  384 (386)
T ss_pred             CEEEEEEEEEEEECCCCEEEEEEEEEEEEEEEECCCCCCCCCCCCHHHHCCCCCCCCEEEEEEEEEEEEEC
T ss_conf             15605998999992899999932788014455017715751212147507977757368999999718957