HHsearch alignment for GI: 254780727 and conserved domain: PRK10560
>PRK10560 hofQ outer membrane porin HofQ; Provisional.
Probab=100.00 E-value=0 Score=383.19 Aligned_cols=278 Identities=24% Similarity=0.374 Sum_probs=223.0
Q ss_pred CCCHHHHHHHHHHHCC-CCCEEEEEECCEEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCE
Q ss_conf 4541478999998578-771699983894999997199999999999999861223455555665443035543277722
Q gi|254780727|r 117 ERDIAHLEMTLRRFIA-DSNIRVEMVSDTVVLHGMVRTIQDSQRAVELSETFLSQSGRNQYANSSSKKVMNLLNIAGEDQ 195 (474)
Q Consensus 117 ~~d~~~l~~~l~~~~p-~~~i~v~~~~~~vvl~G~v~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~vvn~l~v~~~~Q 195 (474)
T Consensus 100 ya~~~~~~~~~~~~ls~~g~i~~d~~tN~liV~~t---~~~~~~i~~l---------------------i~~lD~~~-~Q 154 (386)
T PRK10560 100 YADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDN---KTALSALEQW---------------------VAQMDLPV-GQ 154 (386)
T ss_pred ECCHHHHHHHHHHHCCCCCEEEEECCCCEEEEECC---HHHHHHHHHH---------------------HHHHCCCC-CE
T ss_conf 08999999765532267730999368887999749---9999999999---------------------99746767-77
Q ss_pred EEEEEEEEEEECHHHHHCCCEEEECCCCCCCCCCCCCCCCC----CCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCEEE
Q ss_conf 79999999985001442261210014543364435455666----66666543033420377414311023773597589
Q gi|254780727|r 196 VTLKVTIAEVRRDILKQIGFQHSITGSSSGPSKSFAADFGG----KFVSEGGDFSVKGVLDRFSFETVLHALERATAIRT 271 (474)
Q Consensus 196 V~lev~i~EVs~~~~~~lGi~w~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~aL~~~g~a~i 271 (474)
T Consensus 155 V~Iea~IvEv~~~~~~~lGv~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~l~~~l~aL~~~g~~~i 233 (386)
T PRK10560 155 VELAAHIVTINEKSLRELGVKWTLADAQQAGGVGQVTTLGSDLSVATATTHVGFN-IGRINGRLLDLELSALEQKQQLDI 233 (386)
T ss_pred EEEEEEEEEEECCCHHHHCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE-EECCCCHHHHHHHHHHHHCCCCEE
T ss_conf 9999999999778338607223413466788646544446654455644543146-521363558886799873898439
Q ss_pred EECCEEEEECCCEEEEEECCCEEEEECCCCCCCEEEEEEEEEEEEEEEEEEECCCEEEEEEEEEECCCCC--CCCCCCCC
Q ss_conf 8422389875946757524730000013677620468988758999998981598499986123203445--55566532
Q gi|254780727|r 272 LAEPTLTAISGQSASFTSGGQHLYKTVSSSTGATSVTTHDYGVVLHFTPTVLSPGRIGLRIQTEVSEPVI--GVNAGDMP 349 (474)
Q Consensus 272 La~P~l~t~sgq~A~~~~G~e~pi~~~~~~~~~~~v~~~~~Gi~L~vtP~V~~~g~I~L~i~~evS~~~~--~~~~~~~P 349 (474)
T Consensus 234 lS~P~i~t~~n~~A~I~vG~~ip~~~~~~~~~~t~~~~~~~gl~L~VtP~I~~dg~I~l~i~i~~~~~~~~~~~~~~~~~ 313 (386)
T PRK10560 234 IASPRLLASHLQPASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQADGEVL 313 (386)
T ss_pred EECCEEEEECCCEEEEECCEEEEEEECCCCCCCEEEEEEEEEEEEEEEEEECCCCEEEEEEEEEECCCCCCCCCCCCCCC
T ss_conf 86787998379779998531998995147777325899997689999889988991999999974377620205787654
Q ss_pred EEEEEEEEEEEEECCCCEEEEEEEEEEEECCCCCCCCCEECCCCEEECCCCCCCCCCEEEEEEEEECEECC
Q ss_conf 16789999999985899899997665310132125711201761200016564552115999999051503
Q gi|254780727|r 350 SYRVRKADTTVELPSGGTIVLAGLLKDDIQQLKEGIPLLSKIPILGALFRNSRFNREETEIFIAATPFLVK 420 (474)
Q Consensus 350 ~i~~R~~~T~V~l~~Get~vIgGL~~~~~~~~~~~vP~LgdIPilG~LF~s~~~~~~~tELvI~iTP~iV~ 420 (474)
T Consensus 314 ~i~~r~~~T~v~v~dGetvviGGLi~~~~~~~~~~VP~LgdIP~lG~LF~~~~~~~~k~eLlIfItP~Iv~ 384 (386)
T PRK10560 314 AIDKQEIETQVEVKSGETLALGGIFSRKNKSGQDSVPLLGDIPWFGQLFRHDGKEDERRELVVFITPRLVS 384 (386)
T ss_pred CEEEEEEEEEEEECCCCEEEEEEEEEEEEEEEECCCCCCCCCCCCHHHHCCCCCCCCEEEEEEEEEEEEEC
T ss_conf 15605998999992899999932788014455017715751212147507977757368999999718957