HHsearch alignment for GI: 254780727 and conserved domain: PRK10568
>PRK10568 periplasmic protein; Provisional.
Probab=95.84 E-value=0.057 Score=29.68 Aligned_cols=95 Identities=21% Similarity=0.279 Sum_probs=57.5
Q ss_pred CCEEEEEECCCCEE-----EEEEECCCCCEEEEEEEECCC-----------CHHHHHHHHHH------HCCCCCEEEEEE
Q ss_conf 98799995267227-----999988999778999873045-----------41478999998------578771699983
Q gi|254780727|r 84 PRTMYLFGKNVGQA-----NVILIGHDGKQMLNLDILIER-----------DIAHLEMTLRR------FIADSNIRVEMV 141 (474)
Q Consensus 84 ~~~i~i~gk~~G~T-----~l~v~~~~g~~~~~~~v~v~~-----------d~~~l~~~l~~------~~p~~~i~v~~~ 141 (474)
T Consensus 86 ~G~VlLsG~V~s~~~k~~A~~iA~~V~GV~~V~NeL~V~~~~~~s~~~~a~D~-~ITtkvKa~Ll~d~~v~s~~i~V~T~ 164 (203)
T PRK10568 86 QKVVTLSGFVESQAQAEEAVKVAKGVEGVTSVSDKLHVRDAKEGSVKGYAGDT-ATTSEIKAKLLADDIVPSRKVKVETT 164 (203)
T ss_pred CCEEEEEEECCCHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCCHH-HHHHHHHHHHHCCCCCCCEEEEEEEE
T ss_conf 58899974069999999999998528982388766897058886501236509-99999999863178877258899996
Q ss_pred CCEEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEC
Q ss_conf 8949999971999999999999998612234555556654430355432
Q gi|254780727|r 142 SDTVVLHGMVRTIQDSQRAVELSETFLSQSGRNQYANSSSKKVMNLLNI 190 (474)
Q Consensus 142 ~~~vvl~G~v~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~vvn~l~v 190 (474)
T Consensus 165 nGvV~L~G~V~s~~E~~rA~~iAr~V~GV-----------k~V~N~l~V 202 (203)
T PRK10568 165 DGVVQLSGTVDSQAQSDRAESIAKAVDGV-----------KSVKNDLKV 202 (203)
T ss_pred CEEEEEEEEECCHHHHHHHHHHHHCCCCC-----------EEEEEEEEE
T ss_conf 53999999989999999999998549996-----------088876898