HHsearch alignment for GI: 254780727 and conserved domain: PRK13568
>PRK13568 hofQ putative outer membrane porin HofQ; Provisional.
Probab=100.00 E-value=0 Score=379.01 Aligned_cols=278 Identities=20% Similarity=0.306 Sum_probs=219.9
Q ss_pred CCCHHHHHHHHHHH-----CCCCCEEEEEECCEEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECC
Q ss_conf 45414789999985-----7877169998389499999719999999999999986122345555566544303554327
Q gi|254780727|r 117 ERDIAHLEMTLRRF-----IADSNIRVEMVSDTVVLHGMVRTIQDSQRAVELSETFLSQSGRNQYANSSSKKVMNLLNIA 191 (474)
Q Consensus 117 ~~d~~~l~~~l~~~-----~p~~~i~v~~~~~~vvl~G~v~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~vvn~l~v~ 191 (474)
T Consensus 97 ~~~~~~~~~~~~~~~~~~~s~~g~v~~d~~tNsliV~~~---~~~~~~i~~l---------------------i~~LD~~ 152 (385)
T PRK13568 97 YANAEQVADSLDPLQGGLLSPLGSVVADKRTNTLLIRDT---PASLALLKNW---------------------LIEMDLP 152 (385)
T ss_pred CCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCEEEEECC---HHHHHHHHHH---------------------HHHHCCC
T ss_conf 288999999876502653356630898576777999639---9999999999---------------------9974565
Q ss_pred CCCEEEEEEEEEEEECHHHHHCCCEEEECCCCCCCCCCCC---CCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCC
Q ss_conf 7722799999999850014422612100145433644354---5566666666543033420377414311023773597
Q gi|254780727|r 192 GEDQVTLKVTIAEVRRDILKQIGFQHSITGSSSGPSKSFA---ADFGGKFVSEGGDFSVKGVLDRFSFETVLHALERATA 268 (474)
Q Consensus 192 ~~~QV~lev~i~EVs~~~~~~lGi~w~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~aL~~~g~ 268 (474)
T Consensus 153 ~-~QV~Iea~IvEvs~~~~~~lGv~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~l~~~l~aL~~~g~ 230 (385)
T PRK13568 153 L-QQVQLSAHIVTISSEDLQELGVRWGMGEGKGNTALRINDFNVNLPLPNSAASVGFH-VARIGGRLLELELSALEQENQ 230 (385)
T ss_pred C-CEEEEEEEEEEEECCCHHHCCEEEEECCCCCCCCEECCCCCCCCCCCCCCCCCCEE-EEECCCHHHHHHHHHHHHCCC
T ss_conf 5-65999999999835714750656650258886413236643356677753334337-642162768899789874898
Q ss_pred EEEEECCEEEEECCCEEEEEECCCEEEEECCCCCCCEEEEEEEEEEEEEEEEEEECCCEEEEEEEEEECCCC--CCCCCC
Q ss_conf 589842238987594675752473000001367762046898875899999898159849998612320344--555566
Q gi|254780727|r 269 IRTLAEPTLTAISGQSASFTSGGQHLYKTVSSSTGATSVTTHDYGVVLHFTPTVLSPGRIGLRIQTEVSEPV--IGVNAG 346 (474)
Q Consensus 269 a~iLa~P~l~t~sgq~A~~~~G~e~pi~~~~~~~~~~~v~~~~~Gi~L~vtP~V~~~g~I~L~i~~evS~~~--~~~~~~ 346 (474)
T Consensus 231 ~~vlS~P~i~t~nn~~A~I~vG~~vp~~~~~~~~~~~~~~~~~~gl~L~VtP~I~~dg~I~l~i~i~~~~~~~~~~~~~~ 310 (385)
T PRK13568 231 VDIIASPRLITSHQQTASIKQGSDIPYTVSRGKKEAAAIEFKEAVLGMEVTPKILRNGKIILDLKISQNMPGITIKRGES 310 (385)
T ss_pred CEEEECCEEEEECCCEEEEECCCEEEEEEEECCCCCEEEEEEEEEEEEEEEEEECCCCCEEEEEEEEECCCCCCCCCCCC
T ss_conf 35961684899779638997687899998607877404789876688999878868995899999874367620024777
Q ss_pred CCCEEEEEEEEEEEEECCCCEEEEEEEEEEEECCCCCCCCCEECCCCEEECCCCCCCCCCEEEEEEEEECEECC
Q ss_conf 53216789999999985899899997665310132125711201761200016564552115999999051503
Q gi|254780727|r 347 DMPSYRVRKADTTVELPSGGTIVLAGLLKDDIQQLKEGIPLLSKIPILGALFRNSRFNREETEIFIAATPFLVK 420 (474)
Q Consensus 347 ~~P~i~~R~~~T~V~l~~Get~vIgGL~~~~~~~~~~~vP~LgdIPilG~LF~s~~~~~~~tELvI~iTP~iV~ 420 (474)
T Consensus 311 ~~~~i~~r~~~T~v~v~dG~tvviGGli~~~~~~~~~~VP~LgdIP~iG~LF~~~~~~~~k~ELlIfITP~Ii~ 384 (385)
T PRK13568 311 EMLLIDKQEIKTQVTVNDGETIVLGGIFQQKKRQSVNKVPLLADIPLLGAMFRQDTQQQSRRELVIFITPKLIS 384 (385)
T ss_pred CCCEEEEEEEEEEEEECCCCEEEEEEEEECCEEEEECCCCCCCCCCCCHHHHCCCCCCCCEEEEEEEEEEEEEC
T ss_conf 76405506999999994899999903788213103007705853444416507977757468999999849945