BLAST/PSIBLAST alignment of GI: 254780727 and GI: 325291659 at iteration 1
>gi|325291659|ref|YP_004277523.1| component of type IV pilus [Agrobacterium sp. H13-3] Length = 527
>gi|325059512|gb|ADY63203.1| component of type IV pilus [Agrobacterium sp. H13-3] Length = 527
Score = 399 bits (1024), Expect = e-109, Method: Compositional matrix adjust.
Identities = 222/499 (44%), Positives = 322/499 (64%), Gaps = 51/499 (10%)
Query: 20 NPSVAKLPPIKEANAAVINISDVEIGKGKKISIGLNKVIILQVPVDVQDVLVSDPTKADV 79
+P+ ++ + +A+++ I++ G K++ +GLNK +++ +P D D+LV+DP+ AD
Sbjct: 36 SPAFLRISEAEAQSASIVRITESGSGIRKRLKLGLNKALVIDLPEDAHDILVADPSLADA 95
Query: 80 VVHSPRTMYLFGKNVGQANVILIGHDGKQMLNLDILIERDIAHLEMTLRRFIADSNIRVE 139
V + + +YLFGK VGQ N+ + G G+++++LD+ +ERDI+ LE +RRFI +S+I+VE
Sbjct: 96 VTRTSKRIYLFGKTVGQTNIFIFGDGGREIVSLDLEVERDISGLEANIRRFIPESDIKVE 155
Query: 140 MVSDTVVLHGMVRTIQDSQRAVELSETFL----------SQSGRNQYA-------NSSSK 182
+VSD +VL G VRT QDS RAV+L+E FL S +G N N +
Sbjct: 156 IVSDNIVLTGSVRTPQDSARAVQLAEAFLKGGEATTRNISLTGGNNGGDAAIFAENRQTS 215
Query: 183 KVMNLLNIAGEDQVTLKVTIAEVRRDILKQIGFQHSITGSS-------SGPSKSFAADFG 235
+++N+L I GEDQVTLKVT+AEV R +LKQ+GF SI+ S+ S PS A G
Sbjct: 216 QIVNMLTIEGEDQVTLKVTVAEVSRQVLKQLGFNGSISSSTSNNGFEFSNPSNLGNAISG 275
Query: 236 GKFVSEGGDFSVKGVLDRFSFETVLHALERATAIRTLAEPTLTAISGQSASFTSGGQHLY 295
++ G S G L+ F + L+A+E+A +RTLAEP+LTAISG+ A F GG
Sbjct: 276 ASRIASGAIGS--GSLN---FASYLNAMEQAGVVRTLAEPSLTAISGEQAKFYVGGDFRL 330
Query: 296 K-----TVSSSTGATSVT----THDYGVVLHFTPTVLSPGRIGLRIQTEVSEP-----VI 341
T+ TG ++T T DYG+ L+F P VLSPGRI L+I+T VSEP V+
Sbjct: 331 PAEQEVTIDKDTGQPTITRTTNTVDYGITLNFRPVVLSPGRISLKIETNVSEPTYEGNVV 390
Query: 342 GVNAG-DMP-----SYRVRKADTTVELPSGGTIVLAGLLKDDIQQLKEGIPLLSKIPILG 395
NAG +P S R R+ TTVELPSGG+IV+AGL++D+I+Q G+P +SK+PI G
Sbjct: 391 TGNAGRTIPGSTYMSIRKRETSTTVELPSGGSIVIAGLVQDNIRQAMSGLPGISKVPIFG 450
Query: 396 ALFRNSRFNREETEIFIAATPFLVKPVAMRDLSRPDDHYSVEDDAKAFFFNRVNKIYGPK 455
LFR+ F R ETE+ I ATP+LV+PVA ++RPDD+++ E+DA +F NRVNK+YG K
Sbjct: 451 TLFRSKDFIRNETELVIIATPYLVRPVARNQIARPDDNFNPENDAAMYFMNRVNKVYGRK 510
Query: 456 EASEVEGQNYKGAIGFIYK 474
+ +V+ Y+G++GFIYK
Sbjct: 511 D--QVQAAPYQGSVGFIYK 527