BLAST/PSIBLAST alignment of GI: 254780727 and GI: 86355864 at iteration 1
>gi|86355864|ref|YP_467756.1| pilus assembly secretion protein [Rhizobium etli CFN 42] Length = 498
>gi|86279966|gb|ABC89029.1| pilus assembly secretion protein [Rhizobium etli CFN 42] Length = 498
 Score =  422 bits (1084), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 227/473 (47%), Positives = 312/473 (65%), Gaps = 37/473 (7%)

Query: 29  IKEANAA--VINISDVEIGKGKKISIGLNKVIILQVPVDVQDVLVSDPTKADVVVHSPRT 86
           + EA AA  ++ IS       +++ +GLNK +++ +P D  D+LVSDPT AD V  + R 
Sbjct: 36  VNEARAAESLVRISQTGPDAHRRLKLGLNKAVVVDLPEDAHDILVSDPTMADAVTRTSRR 95

Query: 87  MYLFGKNVGQANVILIGHDGKQMLNLDILIERDIAHLEMTLRRFIADSNIRVEMVSDTVV 146
           +YLFGK VGQ N+ + G  G++++NLDI IERD++ LE  LRRFI DSNI+VE+VSD +V
Sbjct: 96  IYLFGKKVGQTNIFVFGAGGQEVVNLDIEIERDVSGLETNLRRFIPDSNIKVEIVSDNIV 155

Query: 147 LHGMVRTIQDSQRAVELSETFL---SQSGRNQYANSS--------------SKKVMNLLN 189
           L G VRT QD+ +A +L++ FL     + R + A+ +              + +V+NLL 
Sbjct: 156 LTGTVRTPQDATQAADLAQVFLKGGEATTRTETASGTGGDSSVALFAEGRQTSQVVNLLQ 215

Query: 190 IAGEDQVTLKVTIAEVRRDILKQIGFQHSITGSS--------SGPSKSFAADFGGKFVSE 241
           I GEDQVTLKVTI EVRR++LKQ+GF + ++ SS        S  + S  A  GG   + 
Sbjct: 216 IQGEDQVTLKVTITEVRREVLKQLGFDNLVSNSSGMTVAQLGSPNADSATATVGGGLAA- 274

Query: 242 GGDFSVKGVLDRFSFETVLHALERATAIRTLAEPTLTAISGQSASFTSGGQHLYKTVSSS 301
                 K  + ++   T L+ALE+A  +RTLAEPTLTAISGQ+A+F SGGQ LY T + +
Sbjct: 275 ----LFKSSIGKYDISTYLNALEQAKVVRTLAEPTLTAISGQAATFNSGGQQLYST-TDN 329

Query: 302 TGATSVTTHDYGVVLHFTPTVLSPGRIGLRIQTEVSEPVIGVNAGDMPSYRVRKADTTVE 361
            G  +V   +YG+ L F P VLS GRI L I+T VSEPV G  +G+  +Y+ R A+T+VE
Sbjct: 330 NGNVTVVPFNYGINLAFKPVVLSSGRISLEIKTNVSEPVAG--SGNA-TYQRRSAETSVE 386

Query: 362 LPSGGTIVLAGLLKDDIQQLKEGIPLLSKIPILGALFRNSRFNREETEIFIAATPFLVKP 421
           LPSGG+I LAGL++D++ Q   G P +SKIP+LG LFR   F R+ETE+ I ATP+LV+P
Sbjct: 387 LPSGGSIALAGLIRDNVSQTMGGTPGVSKIPLLGTLFRQKGFERQETELVIIATPYLVRP 446

Query: 422 VAMRDLSRPDDHYSVEDDAKAFFFNRVNKIYGPKEASEVEGQNYKGAIGFIYK 474
           VA   L+RPDD++S E+D   FF NRVNK+YG +EA   + Q + G+IGFIYK
Sbjct: 447 VARNQLNRPDDNFSPENDGATFFLNRVNKVYGRREAPVADAQ-FHGSIGFIYK 498