BLAST/PSIBLAST alignment of GI: 254780727 and GI: 86355864 at iteration 1
>gi|86355864|ref|YP_467756.1| pilus assembly secretion protein [Rhizobium etli CFN 42] Length = 498
>gi|86279966|gb|ABC89029.1| pilus assembly secretion protein [Rhizobium etli CFN 42] Length = 498
Score = 422 bits (1084), Expect = e-116, Method: Compositional matrix adjust.
Identities = 227/473 (47%), Positives = 312/473 (65%), Gaps = 37/473 (7%)
Query: 29 IKEANAA--VINISDVEIGKGKKISIGLNKVIILQVPVDVQDVLVSDPTKADVVVHSPRT 86
+ EA AA ++ IS +++ +GLNK +++ +P D D+LVSDPT AD V + R
Sbjct: 36 VNEARAAESLVRISQTGPDAHRRLKLGLNKAVVVDLPEDAHDILVSDPTMADAVTRTSRR 95
Query: 87 MYLFGKNVGQANVILIGHDGKQMLNLDILIERDIAHLEMTLRRFIADSNIRVEMVSDTVV 146
+YLFGK VGQ N+ + G G++++NLDI IERD++ LE LRRFI DSNI+VE+VSD +V
Sbjct: 96 IYLFGKKVGQTNIFVFGAGGQEVVNLDIEIERDVSGLETNLRRFIPDSNIKVEIVSDNIV 155
Query: 147 LHGMVRTIQDSQRAVELSETFL---SQSGRNQYANSS--------------SKKVMNLLN 189
L G VRT QD+ +A +L++ FL + R + A+ + + +V+NLL
Sbjct: 156 LTGTVRTPQDATQAADLAQVFLKGGEATTRTETASGTGGDSSVALFAEGRQTSQVVNLLQ 215
Query: 190 IAGEDQVTLKVTIAEVRRDILKQIGFQHSITGSS--------SGPSKSFAADFGGKFVSE 241
I GEDQVTLKVTI EVRR++LKQ+GF + ++ SS S + S A GG +
Sbjct: 216 IQGEDQVTLKVTITEVRREVLKQLGFDNLVSNSSGMTVAQLGSPNADSATATVGGGLAA- 274
Query: 242 GGDFSVKGVLDRFSFETVLHALERATAIRTLAEPTLTAISGQSASFTSGGQHLYKTVSSS 301
K + ++ T L+ALE+A +RTLAEPTLTAISGQ+A+F SGGQ LY T + +
Sbjct: 275 ----LFKSSIGKYDISTYLNALEQAKVVRTLAEPTLTAISGQAATFNSGGQQLYST-TDN 329
Query: 302 TGATSVTTHDYGVVLHFTPTVLSPGRIGLRIQTEVSEPVIGVNAGDMPSYRVRKADTTVE 361
G +V +YG+ L F P VLS GRI L I+T VSEPV G +G+ +Y+ R A+T+VE
Sbjct: 330 NGNVTVVPFNYGINLAFKPVVLSSGRISLEIKTNVSEPVAG--SGNA-TYQRRSAETSVE 386
Query: 362 LPSGGTIVLAGLLKDDIQQLKEGIPLLSKIPILGALFRNSRFNREETEIFIAATPFLVKP 421
LPSGG+I LAGL++D++ Q G P +SKIP+LG LFR F R+ETE+ I ATP+LV+P
Sbjct: 387 LPSGGSIALAGLIRDNVSQTMGGTPGVSKIPLLGTLFRQKGFERQETELVIIATPYLVRP 446
Query: 422 VAMRDLSRPDDHYSVEDDAKAFFFNRVNKIYGPKEASEVEGQNYKGAIGFIYK 474
VA L+RPDD++S E+D FF NRVNK+YG +EA + Q + G+IGFIYK
Sbjct: 447 VARNQLNRPDDNFSPENDGATFFLNRVNKVYGRREAPVADAQ-FHGSIGFIYK 498