RPSBLAST alignment for GI: 254780727 and conserved domain: TIGR02519
>gnl|CDD|162901 TIGR02519, pilus_MshL, pilus (MSHA type) biogenesis protein MshL. Members of this family are predicted secretins, that is, outer membrane pore proteins associated with delivery of proteins from periplasm to the outside of the cell. Related families include GspD of type II secretion (TIGR02517), the YscC/HrcC family from type III secretion (TIGR02516), and the PilQ secretin of type IV pilus formation (TIGR02515). Members of this family are found in gene clusters associated with MSHA (mannose-sensitive hemagglutinin) and related pili, and appear to be the secretin of this pilus system. Length = 290
Score = 92.4 bits (230), Expect = 2e-19
Identities = 61/232 (26%), Positives = 98/232 (42%), Gaps = 32/232 (13%)
Query: 210 LKQIGFQHSITGSSSGPSK--SFAADFGGKFVSEGGDFSVKGVLDRFSFETVLHALERAT 267
K +G +S S + S F + G GV F F+++++ L
Sbjct: 69 YKALGAANSNDSSGNQFSSGLGFLDNIG---------LPT-GVNSGFGFDSIINFLATFG 118
Query: 268 AIRTLAEPTLTAISGQSASFTSGGQHLYKTVSSST----GATSVTTHDY-------GVVL 316
+ L+ P + A++ Q A + G Y T SST G TS + D G+VL
Sbjct: 119 DTKVLSNPKVMALNNQPAVISVGDNIRYVTEESSTGTTGGTTSTASSDTRVDSVFSGIVL 178
Query: 317 HFTPTVLSPGRIGLRIQTEVSE---------PVIGVNAGDMPSYRVRKADTTVELPSGGT 367
TP + G++ L + +SE PV +P V++ + + + G T
Sbjct: 179 GVTPQISDDGKVILNVHPSISEVKPQSIDLNPVGNGAEVALPEISVKEMSSVLRVKDGDT 238
Query: 368 IVLAGLLKDDIQQLKEGIPLLSKIPILGALFRNSRFNREETEIFIAATPFLV 419
+VL GL+ K G+P L IP LG LF ++++TE+ I P +V
Sbjct: 239 VVLGGLIDKKKSNTKTGLPFLGDIPGLGYLFGYKSKSKKKTELVIIIRPSVV 290