RPSBLAST alignment for GI: 254780727 and conserved domain: COG1450
>gnl|CDD|31639 COG1450, PulD, Type II secretory pathway, component PulD [Cell motility and secretion / Intracellular trafficking and secretion]. Length = 587
Score = 120 bits (302), Expect = 8e-28
Identities = 59/242 (24%), Positives = 107/242 (44%), Gaps = 11/242 (4%)
Query: 194 DQVTLKVTIAEVRRDILKQIGFQHSITGSSSG----PSKSFAADFGGKFVSEGGDFSVKG 249
QV ++ +I EV + L+Q+G S S G + S G +
Sbjct: 311 KQVEIEASIVEVSLNDLEQLGVNWSALNSGGGKVGNTNSSLGNAGLSGGALAGLVSGINT 370
Query: 250 VLDRFSFETVLHALERATAIRTLAEPTLTAISGQSASFTSGGQH----LYKTVSSSTGAT 305
+ +F+ +++AL + L+ P+L ++ Q A G T +
Sbjct: 371 GAGKSNFDALINALSQNGDANVLSTPSLLTLNNQQAIIDVGQDVPQTGTSYTKVTGEKTA 430
Query: 306 SVTTHDYGVVLHFTPTVLSPGRIGLRIQTEVSEPV---IGVNAGDMPSYRVRKADTTVEL 362
++ D GV+L TP + GR+ L I+ EVS + +P+ R+ T V +
Sbjct: 431 TLERIDVGVMLKVTPRINDDGRVLLDIEQEVSSVATSDSVTSNDPLPTTNKREITTEVRV 490
Query: 363 PSGGTIVLAGLLKDDIQQLKEGIPLLSKIPILGALFRNSRFNREETEIFIAATPFLVKPV 422
G +++L GL++D +P L IP++G+LFR++ R++TE+ TP +++
Sbjct: 491 KDGDSLLLGGLIQDKQSDSVSKVPFLGDIPLIGSLFRSTSKTRKKTELMFFITPRIIRSP 550
Query: 423 AM 424
A
Sbjct: 551 AE 552