RPSBLAST alignment for GI: 254780727 and conserved domain: COG4796
>gnl|CDD|34405 COG4796, HofQ, Type II secretory pathway, component HofQ [Intracellular trafficking and secretion]. Length = 709
Score = 80.1 bits (197), Expect = 1e-15
Identities = 52/173 (30%), Positives = 84/173 (48%), Gaps = 4/173 (2%)
Query: 253 RFSFETVLHALERATAIRTLAEPTLTAISGQSASFTSGGQHLYKTVSSSTGA--TSVTTH 310
+ L ALE+ + LA P L +G+ AS G + Y+ S G TSV
Sbjct: 537 GPLLDLELSALEQEGRAKILASPRLITANGEPASIKQGTEIPYQVASGGGGGTITSVEFK 596
Query: 311 DYGVVLHFTPTVLSPGRIGLRIQTEVSEP--VIGVNAGDMPSYRVRKADTTVELPSGGTI 368
+ + L TP + GRI L + P V + G++P ++ +T V + +G T+
Sbjct: 597 EAVLGLEVTPRITPDGRIFLDLFVTQDSPGQVQVIGVGEIPLISKQEINTQVIVKNGETV 656
Query: 369 VLAGLLKDDIQQLKEGIPLLSKIPILGALFRNSRFNREETEIFIAATPFLVKP 421
VL G+ ++ + +PLL IP++GALFR + E E+ I TP +++P
Sbjct: 657 VLGGIFQEADRSTVSKVPLLGDIPVIGALFRTTTKTTERRELLIFITPRIIEP 709