RPSBLAST alignment for GI: 254780727 and conserved domain: COG4964
>gnl|CDD|34571 COG4964, CpaC, Flp pilus assembly protein, secretin CpaC [Intracellular trafficking and secretion]. Length = 455
Score = 335 bits (860), Expect = 2e-92
Identities = 179/461 (38%), Positives = 254/461 (55%), Gaps = 19/461 (4%)
Query: 22 SVAKLPPIKEANA-AVINISDVEIGKGKKISIGLNKVIILQVPVDVQDVLVSDPTKADVV 80
SV + P+ A A AV I+ K + + L K + +P D D+LV DP AD V
Sbjct: 6 SVYRTLPMASAAAPAVARIALSSASATKTLKLELGKSKTVVLPSDADDILVGDPNIADAV 65
Query: 81 VHSPRTMYLFGKNVGQANVILIGHDGKQMLNLDILIERDIAHLEMTLRRFIADSNIRVEM 140
+ + R++Y+ GK+VG NV + G +G+ +++LDI + RD + L +R I DS I+V
Sbjct: 66 LLTDRSIYILGKSVGTTNVFVFGEEGRSIVSLDIEVTRDTSGLGAPIRAVIPDSRIKVSS 125
Query: 141 VSDTVVLHGMVRTIQDSQRAVELSETFLSQSGRNQYANSSSKKVMNLLNIAGEDQVTLKV 200
V+D VVL G VRT D++ AV ++ FL + +L+ +AG QV LKV
Sbjct: 126 VNDRVVLSGSVRTAVDAESAVRIASQFLG----------GGEVTNSLITVAGSQQVQLKV 175
Query: 201 TIAEVRRDILKQIGFQHSITGSSSGPSKSFAA---DFGGKFVSEGGDFSVKGVLDRFSFE 257
+ EV R +LKQ+G S G SG SF A G + +G F + S +
Sbjct: 176 RVVEVSRSVLKQLGANLSARGGFSGGPVSFGALAVLGTGLGLEKGTTFGSLLSDNGVSID 235
Query: 258 TVLHALERATAIRTLAEPTLTAISGQSASFTSGGQHLYKTVSSSTGATSVTTHDYGVVLH 317
++ALE RTLAEP LTA+SG++ASF +GG+ G ++ ++GV L
Sbjct: 236 AYINALEANGLARTLAEPNLTALSGETASFLAGGEFPIPVPDDKNGNVTIEYKEFGVGLT 295
Query: 318 FTPTVLSPGRIGLRIQTEVSEPVIG----VNAGDMPSYRVRKADTTVELPSGGTIVLAGL 373
FTPTVLS GRI L++ EVSE V G +P R+ADTTVEL SG + V+ GL
Sbjct: 296 FTPTVLSNGRISLKVAPEVSELDYSGSVAVGGGTVPGLTTRRADTTVELASGQSFVIGGL 355
Query: 374 LKDDIQQLKEGIPLLSKIPILGALFRNSRFNREETEIFIAATPFLVKPVAMRDLSRPDDH 433
L+ +++ + +P L IPILGALFR+ F R ETE+ I TP+LVKPVA L P D
Sbjct: 356 LQSNVRGAVDKVPGLGDIPILGALFRSKDFQRNETELVIIVTPYLVKPVAPGQLPAPPDD 415
Query: 434 YSVEDDAKAFFFNRVNKIYGPKEASEVEGQNYKGAIGFIYK 474
++ D +F VN++YG A + + Y GA+GF+ K
Sbjct: 416 FTPASDPALYFLGNVNRVYG-FPAGQTDAARYGGAVGFVIK 455