HHsearch alignment for GI: 254780728 and conserved domain: TIGR03569
>TIGR03569 NeuB_NnaB N-acetylneuraminate synthase. This family is a subset of the pfam03102 and is believed to include only authentic NeuB N-acetylneuraminate (sialic acid) synthase enzymes. The majority of the genes identified by this model are observed adjacent to both the NeuA and NeuC genes which together effect the biosynthesis of CMP-N-acetylneuraminate from UDP-N-acetylglucosamine.
Probab=96.40 E-value=0.0031 Score=37.35 Aligned_cols=55 Identities=16% Similarity=0.090 Sum_probs=44.5
Q ss_pred CEEEEEEECCCCCCCCEECHHHEEEEECCHHHCCCHHCCCCCCCCCCHHCCCCEEECCCCCCCCC
Q ss_conf 70489997263688966275341315525133792000021124540000350442022788712
Q gi|254780728|r 44 KFINVLISKGDLAVGMVVTPNILEWVAFPEENVFDGFIDDVHQPNAMQELDGVLVRVPILKGDPI 108 (263)
Q Consensus 44 ~~v~V~va~~di~~G~~It~~dl~~~~~p~~~~p~~a~~~~~~~~~~~~~~G~~~~~~i~~G~~i 108 (263)
T Consensus 275 ~~rrsi~a~k~i~kG~~l~~~di~~~R-P~~Gi~~~~~---------~~iiGkk~~k~i~kg~~I 329 (329)
T TIGR03569 275 VARKSLVAAKDIKKGEIFTEDNLTVKR-PGNGISPMEY---------WEVIGKKASRDYEEDELI 329 (329)
T ss_pred HCCEEEEEECCCCCCCEECHHHEEEEC-CCCCCCHHHH---------HHHCCCCCCCCCCCCCCC
T ss_conf 441799994742898896488867879-9999898899---------986491075568995909