HHsearch alignment for GI: 254780728 and conserved domain: TIGR03586
>TIGR03586 PseI pseudaminic acid synthase.
Probab=96.86 E-value=0.001 Score=40.22 Aligned_cols=54 Identities=22% Similarity=0.277 Sum_probs=41.5
Q ss_pred EEEEEEECCCCCCCCEECHHHEEEEECCHHHCCCHHCCCCCCCCCCHHCCCCEEECCCCCCCCC
Q ss_conf 0489997263688966275341315525133792000021124540000350442022788712
Q gi|254780728|r 45 FINVLISKGDLAVGMVVTPNILEWVAFPEENVFDGFIDDVHQPNAMQELDGVLVRVPILKGDPI 108 (263)
Q Consensus 45 ~v~V~va~~di~~G~~It~~dl~~~~~p~~~~p~~a~~~~~~~~~~~~~~G~~~~~~i~~G~~i 108 (263)
T Consensus 274 ~rrsl~a~~~ikkG~~lt~~~i~~~R-P~~Gi~~~~~---------~~viGkk~~~di~k~~pi 327 (327)
T TIGR03586 274 FRRSLYVVKDIKKGEKFTEENVRSVR-PGFGLHPKYL---------DEILGKKANQDIKFGTPL 327 (327)
T ss_pred EEEEEEEECCCCCCCEECHHHEEEEC-CCCCCCHHHH---------HHHCCCEECCCCCCCCCC
T ss_conf 40589993731888885489867779-9899998899---------886391173557998989