HHsearch results for GI: 254780728 and protein with PDBid: 1msi_A

>1msi_A Type III antifreeze protein isoform HPLC 12; multigene family, thermal hysteresis; 1.25A {Macrozoarces americanus} SCOP: b.85.1.1

Probab=97.99  E-value=4.5e-06  Score=52.79  Aligned_cols=59  Identities=8%  Similarity=0.073  Sum_probs=49.2

Q ss_pred             EEEECCCCCCCCEECHHHEEEEECCHHHCCCHHCCCCCCCCCCHHCCCCEEECCCCCCCCCCHHHCCC
Q ss_conf             99972636889662753413155251337920000211245400003504420227887125555001
Q gi|254780728|r   48 VLISKGDLAVGMVVTPNILEWVAFPEENVFDGFIDDVHQPNAMQELDGVLVRVPILKGDPIRLEKLVD  115 (263)
Q Consensus        48 V~va~~di~~G~~It~~dl~~~~~p~~~~p~~a~~~~~~~~~~~~~~G~~~~~~i~~G~~i~~~~l~~  115 (263)
                      =+||+++|++|+.|+.+|+.++.-....+|+..+         +.++|+.++.+|.+|++|+.+++-.
T Consensus         5 SiVA~~~I~~G~~lt~~~l~~Krp~p~GI~P~~~---------~~IIGKkak~dI~~d~~I~~dmik~   63 (70)
T 1msi_A            5 SVVANQLIPINTALTLVMMRSEVVTPVGIPAEDI---------PRLVSMQVNRAVPLGTTLMPDMVKG   63 (70)
T ss_dssp             EEEESSCBCTTCBCCGGGEEEECCSSCCSBGGGH---------HHHTTCBBSSCBCTTCBCCGGGBTT
T ss_pred             EEEECCCCCCCCEECHHHEEEECCCCCCCCHHHH---------HHHHCHHHHCCCCCCCCCCHHHHHH
T ss_conf             3686663599888268980065478898199999---------9982767616648968728999850