HHsearch results for GI: 254780728 and protein with PDBid: 1vli_A

>1vli_A Spore coat polysaccharide biosynthesis protein SPSE; 2636322, structural genomics, JCSG, protein structure initiative, BSU37870, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=96.68  E-value=0.0012  Score=38.45  Aligned_cols=64  Identities=13%  Similarity=0.204  Sum_probs=49.2

Q ss_pred             EEEEEEECCCCCCCCEECHHHEEEEECCH---HHCCCHHCCCCCCCCCCHHCC-CCEEECCCCCCCCCCHHHCCCCCC
Q ss_conf             04899972636889662753413155251---337920000211245400003-504420227887125555001467
Q gi|254780728|r   45 FINVLISKGDLAVGMVVTPNILEWVAFPE---ENVFDGFIDDVHQPNAMQELD-GVLVRVPILKGDPIRLEKLVDRGN  118 (263)
Q Consensus        45 ~v~V~va~~di~~G~~It~~dl~~~~~p~---~~~p~~a~~~~~~~~~~~~~~-G~~~~~~i~~G~~i~~~~l~~~~~  118 (263)
                      ..+-++|+++|++|+.|+.+|+..++ |.   ..+++..         .+.+. |+.++.++.+|++|+.+++...+.
T Consensus       314 ~rrsi~a~~~i~kG~~i~~~di~~~R-Pg~~~~Gi~~~~---------~~~ii~Gk~~~~di~~~~~I~~~di~~k~~  381 (385)
T 1vli_A          314 AYRGIFTTAPIQKGEAFSEDNIAVLR-PGQKPQGLHPRF---------FELLTSGVRAVRDIPADTGIVWDDILLKDS  381 (385)
T ss_dssp             TSCEEEESSCBCTTCBCCTTTEEEEC-CTTSCCCBCGGG---------HHHHHTTCBCSSCBCTTCBCCGGGTSCCC-
T ss_pred             CCEEEEEECCCCCCCEECHHHEEEEC-CCCCCCCCCHHH---------HHHHHCCCEEECCCCCCCCCCHHHHCCCCC
T ss_conf             45799990512889897589946868-778888879899---------999867969906469979868999166578